Cololabis saira (Pacific saury): 133463887
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Entry
133463887 CDS
T09849
Symbol
dhx32b
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133463887 (dhx32b)
Enzymes [BR:
csai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
133463887 (dhx32b)
Spliceosome [BR:
csai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
133463887 (dhx32b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
133463887
NCBI-ProteinID:
XP_061601629
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All DBs
Position
17:23735067..23743505
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AA seq
740 aa
AA seq
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MAQDISSLNGEDCFEGTSPCCSDSEALGPGDKEYDDILELNQFDGLPYSSRFYKLMKERK
ELPVWRAKCEFMDMLAKGQFVVVSGFAKTGRSSQIPQWSAEFLLSVQFQHGTVVCTQIHS
QQAVDLALRVADEMDVNIGHEVGYSIPLEKCCTNETVLRFCTDDVLLREMMSDPLLERYG
VVIVDQAHQRTVATDVLLGLLKDITVQRPELRVVVLSAVEPSPKQLAHLAGSAAPVIRVE
TAGAGEVVHSSSTADNYFCSALRLVLEIHHSEERGDVVVFLVTTQEIDLAHDILCHEGDS
LPSDLGELLPIVAHPGQPGNVLVFGEEETGRTRRVILTSSPNEDFFWAARSIRFVIDAGL
EKRYVYNPRIRTNSVIIQPISAVQSECRRQLAGPTGRCFCLYSKERQLPAEIRPRIVESD
ITSTVLFLKRMEIAGLGHCDFVERPDPGGLMQALEELDYLAALDNDGNLSEMGIIMSEFP
LEPQMAKTVLASCEFDCVSEVVIIAAMLTAPTCFTVPPVELKLEASQCHMKFQHPEGDHF
TLINIYKAFKQHQQDPYCSEEKWCQDFFLNHTALLMADALRAELTETLKRIELPISVPAF
GSRSNTINIKRALLAGFFMQVARDVDGSGNYFILTHKHVAQLHPHSGYGAKSPKLGLPEW
LLFHEHTFSDDNCLHTVTHVTPDQVVQMTPQYFFYNLPSSESKDILQNILNHGAPHYRED
KHRSQEEPQETQTSDRCVIQ
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggacatttccagtttgaatggagaggactgttttgagggaacatcgccctgt
tgttctgactcggaggctttgggtccaggagacaaagagtatgatgacatcttggagctt
aatcagtttgatggactgccgtactcctcgaggttttacaaactgatgaaagagaggaaa
gagctgccagtgtggagagcaaagtgtgaattcatggacatgttggccaagggacagttt
gttgttgtcagcggctttgccaaaactggaaggagctctcaaattccccagtggtctgct
gaattcctcctgtcagtccagttccagcatggcacggtggtttgtacccagattcactct
caacaggctgtcgatctcgccctgagagtggccgacgagatggacgtcaacatcggccac
gaagtcggttacagcatccctctggagaaatgctgcaccaacgagacagtcctcaggttc
tgcacagatgatgtgctcctgagggagatgatgtcagaccctttgcttgagcgctacggt
gtggtgatcgtggatcaggcccaccagaggaccgtggccaccgacgtgctcctgggcctg
ctgaaggacatcaccgtgcagaggccggagctccgcgtggtcgtcctgtcggccgtggaa
ccctcccccaagcagctggcccacctcgccgggtcagcggcgccagtgatccgcgtagag
accgcaggtgcaggggaggtggtgcacagcagcagcacggccgacaactacttctgctct
gccctccgtctcgtgctggagatccatcactccgaggagcggggagatgtggtcgtgttt
ctggtgacaacgcaggaaatagacctggcccatgacatcctgtgtcacgagggggacagt
ttaccatctgatctgggcgagctcctgccaatcgtagcgcaccctggccagcctgggaac
gtgctcgtctttggggaggaggagacgggccgaacacgcagagtaatcctcacatccagc
ccaaacgaggacttcttctgggctgctcgctcaatacgctttgtcattgatgctgggctt
gaaaaaagatatgtctacaaccccaggatcagaacaaactcagtcattattcagcccatc
agtgcggtccagagtgagtgtcgcagacagctggcaggtccaacaggcaggtgtttttgt
ctgtactcgaaggagagacagcttcctgctgagattcgcccacgcatcgtggagtctgac
atcacctccactgttctcttcttaaagaggatggagatcgctggactcggccactgcgac
ttcgtcgagcggccagaccctggaggtctcatgcaggctctggaggagctggactatctt
gctgctctggataatgatggcaacctctctgagatgggcatcatcatgtctgagttcccc
ctggagccccagatggccaagaccgtgctggcctcctgtgagttcgactgtgtcagtgag
gtggtcatcatcgctgccatgctaacagcaccaacttgcttcacggtgccccccgtggag
ctgaagctggaggcgagccagtgccacatgaagttccagcacccagagggagaccacttt
acactaatcaacatctacaaggccttcaagcagcaccagcaggatccatactgcagtgag
gagaagtggtgtcaggatttcttcctgaaccacacagctctgctgatggccgacgctctc
cgagctgagctcacagaaaccttgaagaggatcgagttgcccatctcggtgcctgccttc
ggttcccgcagcaacaccataaacattaagagagcgctccttgcaggcttcttcatgcag
gtcgcgcgggatgtggatggatcggggaactacttcatcctgacccataagcatgtggcc
cagctccatcctcactccggctacggggccaagagccccaagctgggcctcccggagtgg
ctgctctttcatgaacacaccttctcagacgacaactgcctccacacagtaacccacgta
actccggaccaggtcgttcagatgacgccacaatattttttttacaacttgccatcgagt
gagagcaaagacatcctccaaaacattttgaaccatggagctcctcattaccgggaggat
aaacatcgatcgcaagaggaaccccaggagactcagacttctgaccgctgtgtgattcag
tga
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