Cololabis saira (Pacific saury): 133463929
Help
Entry
133463929 CDS
T09849
Symbol
lrit2
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2 isoform X1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csai04990
]
133463929 (lrit2)
Domain-containing proteins not elsewhere classified [BR:
csai04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
133463929 (lrit2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
Ig_3
LRR_4
I-set
LRR_1
Ig_2
ig
fn3
V-set
LRR_EndoS
Ig_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
133463929
NCBI-ProteinID:
XP_061601704
LinkDB
All DBs
Position
17:20663090..20670107
Genome browser
AA seq
572 aa
AA seq
DB search
MDTVCYLLFIILLNSQAHESYAQCLHGCSCIDDRHGRSLICMEESAFGAIPENLPGDVTK
IRIEKSHFTEVPRGVFSNTPALENLWLNFNDITVINSKGLEGLGNLTELRLQGNKLRSVP
WTAFEDTPALKILDLKHNQLDVLPEHALKFLPGLTYLDLSFNQLTVISKEVFQNWPLYQR
LQNLEEREATVSGPNVVLALHDNAWLCDCRLKGFVEFIMSLSPPIILMNSYLTCSGPDFR
AGKFFHELELQACMKPVVSSPAANMSLPQGSNLTLHCVAKARPEPAVWWTYGLKIIRGFH
ESQERVAEDTVKSLLVIPSLHAADRGIYTCTAVNFIGNSSVSVLLDVSAVSSQSPHLPGF
SVMPGAGDENVFIDIHITKQTVRGISIEWFAALDHPSETWFTIHFGHAGIGKKETTYIGP
GIQSYSISDLMPATKYEICVTLKNQVPRPGQCIVFVTGSDITEMEQREKLIHIVVIVLAM
VLAVPLGMYACTTDTRFACVEIIMESWKNRQRESNPSGMEHARQGTFDSLQAASDEGLVK
KDSSEDKKVRRRSEDRLHKGKADHTRLTAELY
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggacacagtttgctacctgctttttataattttgttaaattcgcaagcgcatgaaagt
tatgctcaatgtttacatgggtgcagctgtatagacgaccgtcatggaaggtcgctgata
tgtatggaggagagcgcgtttggggccataccggagaaccttccaggtgatgtgaccaaa
atacgcatagaaaaatctcacttcacggaagttcccagaggggttttctcaaacacgccc
gccttggagaacttgtggttgaacttcaacgacatcacagtgataaactccaagggtttg
gagggtttggggaacttaaccgagctgcgcttgcaagggaacaagctgagatcagtacca
tggacagcgttcgaggacacgccggccctgaagatcctggacctgaagcacaaccagctg
gacgtccttccggagcacgcgttaaaatttctgccaggtctgacatacttagacttatcc
ttcaaccagctcacggtcatatcgaaggaggtcttccaaaactggcctctttaccaaaga
cttcagaacttggaggagcgggaggcgaccgtgtccgggccgaacgtggtcctggctctg
cacgacaacgcctggctgtgcgactgtcgcctgaagggcttcgtggagttcatcatgtct
ttaagccccccgataattctgatgaactcctacttgacctgctcagggccggactttagg
gcggggaagttcttccatgagttagagctgcaggcctgcatgaagcccgtggtgagctcc
cccgcagcaaacatgagcctgccgcagggctccaacctcaccctgcactgcgtggccaag
gccaggccggagcccgccgtgtggtggacatatggtctgaagataatcagaggatttcat
gaatctcaggaaagagttgcagaggatactgtcaaatccctgctggtgatcccctccctc
catgcagctgatcgtggcatctacacgtgcactgcggtcaatttcattggaaactcctca
gttagtgtcctcctagatgtctctgccgtcagttcccagtcaccccatctcccaggcttc
tcagtcatgccaggtgctggagatgaaaatgtcttcattgacatccacatcacaaaacag
acagttcgtggtatctctatcgagtggttcgctgccctagaccacccatctgaaacatgg
ttcaccatccactttggtcatgcaggcattggtaaaaaagaaacgacctacatcggcccg
gggattcaatcttactccatctctgatctgatgcctgcaacaaaatatgaaatctgtgta
accctcaagaaccaggtgccacgtccgggccagtgcattgtgtttgtgacaggaagtgac
attactgagatggagcagagggagaaactcattcatatagtagtgatagttctagccatg
gtgctggctgttcctttaggtatgtatgcctgcaccactgacaccaggtttgcctgtgtg
gagatcatcatggagtcctggaagaaccgccagagagaaagcaacccgtcagggatggag
catgcacggcagggcaccttcgacagtctgcaggctgccagcgatgaaggtctggtcaaa
aaagattccagtgaagacaagaaggtgaggaggaggtcagaggatagactgcataagggc
aaagctgatcacaccagactcacagctgaactatattaa
DBGET
integrated database retrieval system
