Cololabis saira (Pacific saury): 133463965
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Entry
133463965 CDS
T09849
Name
(RefSeq) elongation factor 1-alpha 1
KO
K03231
elongation factor 1-alpha
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133463965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133463965
03016 Transfer RNA biogenesis [BR:
csai03016
]
133463965
03012 Translation factors [BR:
csai03012
]
133463965
04131 Membrane trafficking [BR:
csai04131
]
133463965
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csai04147
]
133463965
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
133463965
Transfer RNA biogenesis [BR:
csai03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
133463965
Translation factors [BR:
csai03012
]
Eukaryotic type
Elongation factors
133463965
Membrane trafficking [BR:
csai04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
133463965
Exosome [BR:
csai04147
]
Exosomal proteins
Proteins found in most exosomes
133463965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Gtr1_RagA
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
133463965
NCBI-ProteinID:
XP_061601791
LinkDB
All DBs
Position
17:28896547..28901457
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AA seq
462 aa
AA seq
DB search
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGINKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPISGWNGDNMLEPSPNMTWFKGWKINRKEGNASGTTLLEALDAIQPPTR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPVNVTTEVKSVEMHHEALT
EALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPQEAANFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVDMIPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKAVEKKVSTTGKITKSAQKAQRNK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggagaagctccacatcaacatagttgtgatcggccacgtggactctggtaag
tccacgacgacgggccacctcatctacaagtgtggcggcatcgacaagagaaccatcgag
aagtttgagaaggaagctgcggagatgggcaagggctccttcaagtacgcctgggtgctg
gacaagctgaaggcggagagggagcggggcatcaccatcgacatctccctgtggaagttt
gagaccagcaaatactatgtaaccatcatagatgccccaggccacagggacttcatcaag
aacatgatcactgggacctcccaggccgactgcgccgtgctcatcgtggcagcaggagta
ggagagttcgaggccggtatttctaagaacgggcagacccgcgagcacgccctcctggcc
tacactctcggagtcaagcagctcatcgttggcatcaacaagatggactccaccgagcca
aactacagccagaagcgctatgaagagatcgtgaaggaagtgagcacctacatcaagaag
attggctacaatcccgacaccgtcgcctttgttcccatttcaggttggaacggagacaac
atgctcgagccgagccccaatatgacatggttcaaggggtggaagatcaataggaaggag
ggcaatgcgtcggggaccacactgctggaggctctagacgccatccagccgccgacccgt
ccaacagacaagcctctgcgtctccccctgcaggacgtctacaagattggaggtattgga
actgtacctgtgggccgtgtggagacgggcatcctgaagcccggcatggtggtgaccttt
gctcccgtcaacgtgaccactgaagtgaaatctgtggagatgcatcacgaggccctgacc
gaggctcttcctggtgacaacgtgggcttcaacgttaagaatgtgtccgtgaaggacatc
cgccggggcaacgtggctggagacagtaagaatgacccaccgcaggaagctgccaacttc
actgctcaggtgatcatcctcaaccacccgggccagatcagtgctggctacgcccccgtg
ctcgactgccacactgctcacattgcctgcaagtttgcggagctcaaggagaagattgac
cgccgctctggcaagaagctggaggacaaccccaagtctcttaaatctggagacgccgcc
atcgtagacatgattcctggaaaacccatgtgtgtggagagcttctccgagtacccgccg
ctgggccgctttgcagtgcgcgacatgcgtcagactgtggcagtgggcgtgataaaggct
gtggagaagaaagtgtccaccactggtaaaattaccaagtctgctcagaaggcccagagg
aacaaatga
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