Cololabis saira (Pacific saury): 133463978
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Entry
133463978 CDS
T09849
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133463978
Membrane trafficking [BR:
csai04131
]
Protein recycling
Others
Others
133463978
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
133463978
NCBI-ProteinID:
XP_061601825
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Position
17:complement(23033078..23096821)
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AA seq
1219 aa
AA seq
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METRLGHCLLMLFSEWIRLFILTSMLGGARAEVRCVPSCQLPLKLPSELDLANFGAAPAG
EFVGFGEGSLTTRGDDGYDVAELTSSEESSLKVEPWSGENQPGGPQRDALRDAPKLSRPP
DNVTGDGRNVQNSDTAVVTEDGHWGSSGTRNLRSARSAETWSEFGAEGVDDAPVPDQEEF
RLTSSTFALAGDTAHNQAMVHWSGQNSSVILMLTKYYDFNSGRVTESSLWRSTDYGTTYE
KLNEKVGSKTILSYLYVSPNNKRKIMLLTDPVVESSLLISLDEGASYQKHSLAFDILSLL
FHPEQEDWILAYSHDQKLYVSVEFGRRWQLVHDNVVPNRFYWSRLGLDKEQGMIHLEISI
SDGRSQYITCKLQNCSDGNKGKPFPGFIIPNSLVVQDEYVFIQVPIGGQPVHYVSYKRNV
FYPMKLPKYTLPKDLQIISTDDNQVVAAIQDWHQNDSYNLYMSESRGLLFTLMLEDVVSS
GGPEDNVMIDLYEVAGIKGVFLSNKVVENQVKTYITYNKGRDWRLLQAPAADLHGNKVFC
EQPYCSLHLHLHVSENPYASGNIVSKDSAPGIIIASGVVGPELVSTNVSIFITSDAGNTW
REVFQEEYSVFFLNQGGSLVAIRHTPLPIRHIWLSFDEGKNWDKYSFTSSPLYVDGVLGE
PGEDILIMTIFGHFSHRSEWQLVKIDFRCIFQRRCTSKDYLTWQLHNEGEMCIMGMKRIF
QKLRANVQCVKARDQYISQMSDSCPCTEADFECDYGFERRTDGSCTPAFWFVPSATSRDC
VTGDSFLNTTGYRKALSNNCTEGSLFKFSPRHQRCPSQAPRGLQLFTSEGTLVATMGKNV
TFLVFLEEGLGSMTSITVDFGDGTAISYVNISSIEDGVKHIYNKVGIYQVSATASNNLGF
ERVALYLHISCQLEQVQLLAPLVVVKNKAVNFTTSLQPSNVGTVTYFWWFDNKTEPLLTL
EGAISFTFSKEGSHSVTVQASAGNTVRQDQMRVAVYDYFKSHVLAFSSNLDELNPGMSEW
RDDVSRAVKSCMVQVTGISEDQLLVTVFPSLPTTAEVFIVPEGRSRDGALDEKWAHLDQL
SRVLLSALNQDLIRFSLRQGVQVNVYATRLSPAPLVDNTDSLHSGTAVIMLVSVVLMGLA
IFVIYKFKRKIPGMNTYTAEQPDKEQEVFTAVTSIDVPNPEADKLTTLDHVDAHLDSKSR
GYLPSHADIKLSDEAPHVF
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggagacgcgtctcggccactgtcttttgatgcttttctctgagtggatccggctcttc
atcctaacttccatgctcggcggggccagagcggaggtgaggtgcgtcccctcctgccag
ctgccgctcaaactaccgtccgagctggatttggccaatttcggcgcggctcctgctggg
gaatttgttggatttggtgaggggtcgctcacgacccgcggggacgacgggtacgacgtt
gcggaattaacatcgagcgaagaaagttcactgaaagtagagccgtggtcaggggagaac
cagccgggcggtccgcagagggacgcgttacgagacgctccaaaactttcccgtcctccc
gataatgtgaccggcgacgggagaaatgtccaaaacagtgacacggcggtggtgaccgag
gacggacattggggcagcagtgggacgcggaacctgcgaagtgccaggagcgcagagact
tggtccgaattcggagccgagggcgtggacgacgctccggttccggaccaggaggagttt
cggctcacaagttccacatttgcgctcgccggggacacggcgcacaaccaggccatggtg
cactggtccggacaaaacagcagcgtgattctcatgttgactaaatactacgacttcaac
tctggcagagtaacagagagttctttatggaggtcaaccgattatgggaccacgtatgaa
aaactaaatgagaaagttggttccaagaccatactgagctacttatatgtgagtccgaac
aacaaaaggaagataatgttactgactgacccagtggtggagagcagcctcctcattagc
cttgacgagggggcgtcctatcagaaacacagcttagcctttgatatcctcagcctgctt
tttcaccccgagcaggaagactggatcttggcttacagccacgaccaaaagctctacgtc
tcggttgaatttgggaggagatggcagcttgtgcatgacaacgtagttcccaacagattc
tactggtccaggctgggtttggacaaagagcaaggaatgattcacctagagatcagcatt
tctgatggacggtcgcagtacataacttgcaaacttcaaaactgctctgatggaaacaag
ggcaagcctttccctggatttatcattcccaattccctcgtggttcaggatgaatacgtt
ttcatccaggtgccaatcggtggccagcctgtccattatgtgtcctataaaagaaatgtt
ttctacccaatgaaacttccaaaatacacccttccaaaggatttgcagataatcagcaca
gatgataaccaggtggtggcagcgatccaggactggcatcagaatgattcctacaacctg
tacatgtctgagtccagagggctgctcttcacgctgatgctggaggacgtggtgagcagt
ggaggtccagaggacaacgtcatgatagacctttatgaggttgctgggattaaaggggtg
ttcctgtcaaataaagttgtggagaaccaagtgaaaacttatatcacatacaacaagggg
agagactggcgtcttcttcaggctccagcagccgatctccacggaaacaaggtcttttgt
gaacaaccttactgttcgttgcatctccaccttcacgtgtcggagaacccttacgcttca
ggaaacattgtcagcaaagattcagctccaggaattataatagcatcaggtgtggttgga
cctgagctggtcagtactaatgtcagcattttcatcacatctgacgctggaaacacctgg
agagaggtgtttcaggaagagtatagtgtatttttcctgaatcaaggaggatctctggtg
gccatcagacacacacctctgccgataagacacatttggctgagttttgatgagggcaaa
aactgggacaaatatagcttcacctcttctccactctatgttgacggggtgctgggggag
cctggagaggacattctcataatgacgatatttggtcatttcagtcatcggtctgagtgg
caactagtcaagattgacttccgctgcattttccaacgacggtgtacttcgaaagactat
ctgacatggcagttacacaatgagggggaaatgtgcatcatgggaatgaagagaatcttc
caaaagctaagagcgaatgttcaatgtgtcaaggccagagatcagtatatttcccagatg
tcagactcctgcccttgcacagaggccgattttgagtgtgactatggctttgagagacgg
actgacgggagctgcactccagctttttggtttgttccttcagcaacatcacgagactgt
gtaacaggggacagcttcctcaacacaacaggatatcgcaaggctttgtctaacaactgt
acggagggaagtcttttcaagttcagcccccggcatcaaaggtgtcccagtcaggctccc
aggggtctgcagctcttcaccagcgagggaacattggtagcaacaatggggaagaatgtc
accttcttggtcttcctggaagagggtcttggctccatgacaagtataacagtggacttt
ggggatgggaccgctatatcctatgttaacataagctccatcgaggacggggtcaagcat
atatacaataaagttggcatctaccaagtttcagctacagcaagcaacaatctgggcttc
gaaagggtcgcgctctacctacacatctcctgtcagcttgagcaggtgcagctcttggct
cctttggtggttgtcaagaacaaagcggtaaatttcaccacatcgctgcaacccagtaat
gtgggaacagtcacttatttctggtggtttgataacaaaacagagcctctcttgaccctg
gaaggagcaatttccttcactttctccaaagaaggaagtcacagtgtcaccgttcaagct
tcagctggcaatactgtccgacaggaccaaatgagggtggcagtttacgattatttcaag
tcacatgttttggctttttcctccaatctggatgagctgaaccccgggatgtccgagtgg
agagatgacgtcagcagagctgtgaagagctgcatggttcaggtcacaggaatcagtgaa
gatcagctgctggtcacagtgttcccaagcttgccaaccacggctgaggtttttatcgta
ccagaggggaggtcgagagatggagcactggatgaaaagtgggcgcacctggatcagctt
tctcgagttctgctaagtgctctgaaccaggacctgatccggttctccctcagacagggg
gtgcaggtgaacgtgtacgccacgcgactgtctccagctccccttgtggacaacactgac
agcttacacagtggcactgcagtcatcatgctggtgtcagtggtgctgatgggcttagcc
atctttgtaatatataaatttaaaaggaagatcccaggcatgaacacgtacacggcagag
cagcctgacaaagaacaagaggtcttcactgccgtgacctccatagacgtccccaaccct
gaagcggacaagctgaccacgctggaccacgtggacgcacatctggactcaaaaagcaga
ggctacctgccatctcacgcggacatcaagctctctgatgaagcgccccatgtgttttaa
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