Cololabis saira (Pacific saury): 133464000
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Entry
133464000 CDS
T09849
Symbol
irx3a
Name
(RefSeq) iroquois-class homeodomain protein IRX-3a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133464000 (irx3a)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
133464000 (irx3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
133464000
NCBI-ProteinID:
XP_061601895
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Position
2:complement(42479385..42481616)
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AA seq
432 aa
AA seq
DB search
MSFPQLGYQYIRPIYPPERQGISGSARGGPELSPSGALSNVLSSMYGAPFAAAAQGYGAF
LPYTNDISIFNQLGAQYELKDSPGVQHPGFAHHHPAFYPYGQYQFGDPSRPKNATRESTS
TLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRNRTD
EEGNVYTSDHEGEEEGDKRDDEEEIDLENIDTENIENKDDLDEQDDLHSDLKLDGRSDSE
ISDGYEDLQGPEQRFLKAVQQGKEGKERGGGHFHSHQHQHQPSLNLNNPVPASSPPSESN
PAPPQKPKIWSLAETATAPDNPRKTHGGGGGAVPGAPAAAAGAPGAAAAQQQQQAIIGPH
RLISSCPVGKMQNWTNRAFSAHQLALLNSNHYLQGLASQATATGLQALYSSSRHTDDKSH
SSDTVTGTCPRH
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttccctcagctgggatatcagtacatccgaccgatatacccgccggagcgccag
gggatctccggcagtgcgcgcggcgggccggagctgagcccgtccggcgcgctctccaac
gtcctctcctccatgtacggagccccgttcgccgccgcggcgcagggctacggcgccttc
ctgccctacaccaacgacatttccatcttcaaccagctgggagcccagtatgagctgaag
gacagtcctggcgtgcagcacccgggcttcgcccaccaccacccggccttctacccctac
ggccagtaccagttcggtgacccgtccagacccaagaacgccacccgggagagcaccagc
accctgaaggcctggctcagcgagcaccgcaagaacccctaccccaccaagggcgagaag
atcatgctggccatcatcaccaagatgacgctcacgcaggtgtccacctggttcgccaac
gccaggaggcggctaaagaaggagaacaagatgacctggacccctcggaaccgcaccgac
gaagaggggaacgtttacaccagcgaccacgagggcgaggaggagggcgacaagagggac
gacgaggaggagatcgacctggagaacatcgacacggagaatattgagaataaggacgac
ttggacgagcaggacgacctgcattcggacctgaaactggacgggaggagtgactccgag
atttcggacggctatgaggatttacaagggccggagcagaggtttctgaaggctgtgcag
caggggaaggagggtaaagagagaggggggggacacttccacagccaccagcaccagcac
cagccgagcctcaacctcaacaacccggtcccggccagctcgccgccgtcggagagcaac
cccgcccccccacagaagccaaagatctggtctttggcagagacggccacggcccccgac
aacccgcgcaagacgcacggcggtggcggcggcgcggtgccgggcgcaccggcagccgcg
gccggtgcgcccggcgcggccgccgcgcagcagcagcagcaggccatcatcggcccacac
agactcatctcctcctgcccggtcgggaaaatgcagaactggacgaaccgggcgttttcg
gcgcaccagctggctttactgaactctaaccactacctgcagggactggccagccaggcc
accgccacgggcctgcaggcgctgtacagcagcagcaggcacacggacgacaagagccac
agctcagacacagtcacaggtacatgtccccgacactga
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