Cololabis saira (Pacific saury): 133464043
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Entry
133464043 CDS
T09849
Name
(RefSeq) vinculin-like isoform X1
KO
K05700
vinculin
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04510
Focal adhesion
csai04520
Adherens junction
csai04810
Regulation of actin cytoskeleton
csai04820
Cytoskeleton in muscle cells
csai05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133464043
04520 Adherens junction
133464043
09142 Cell motility
04820 Cytoskeleton in muscle cells
133464043
04810 Regulation of actin cytoskeleton
133464043
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
133464043
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
csai04812
]
133464043
04147 Exosome [BR:
csai04147
]
133464043
Cytoskeleton proteins [BR:
csai04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
133464043
Exosome [BR:
csai04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133464043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Mob_Pre
NEMO
Motif
Other DBs
NCBI-GeneID:
133464043
NCBI-ProteinID:
XP_061601971
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All DBs
Position
17:4446991..4482989
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AA seq
1125 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTVPVAAVQAAVSNLVRVGKE
TVQTTEDQVMKRDMPPAFIKVENSCSKLVQAAQMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLITYTKNLGPGMTKMSKMIEERQQ
ELTHQEHRQMLVSSMNTIKELLPVLISAIKIFVTTKSSRGAGVEEAEKNRRFTFEKMSAE
INEIIRVLQLTTWDEDAWANKDMEALKRSLALIESRMAQAKGWLKDPHGQPGDSGEVAVR
VILDEAGKVGELCAGKERKDILATTKALGQMTDLVADLRARGQGPTPGCVQRAAQCSQGL
DLLFGKVDNAARRLEALINAKQAIARRLDAAQAWLADPHGGPEGEENIRALLAEAKRIAD
LCEDPKERDDILRSISEIAGLTARLVELRKQGKGDTPEARALAKHIGAALLTLQSKTNRA
VANMRPAKPAVTLEGKMEQALRWVNNPGVDDRGVGQAAIRGMVGEGRRLAGGLLGPYRQD
MIGRCDRTEALMTSLADMANRGEAEAPHARATAAQLQGTLKDLRQHMQEVMTQEVSDVFS
DTTTPIKMLAVAATAPPDAPNREEVFEERAGNFETHAGRLGATAEKAAAVGTANKITVEG
IHAAVKHARELTPQVTSAARIMLKNPGNKAAYEHFDTMKNQWIDNVERLTGLVDEAIDTK
SLLDASEEAIKKDIDKCRVAMANVQPQMLVAGATSIARRANRVLLVAKREVENSEDPRFR
DTVKHASDILSHTISPMVMDAKAVAGNIQDKALQKAYLDSCLRILAAVGKVREAFQPQEP
DFPPPPPDLDQLHVSDEQAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKVGEVLSEPMMV
AARQLHDEARKWSSKPEDVEAVEERDVDDEDEFTDGEDDYEPELLMMPSNQPVNQPILAA
AQALHQEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASDEV
TRLAKEVAKQCTDRRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQATE
MLVHNAQNLMQSVKETVREAEAASIKIRTDAGCTLRWVRKTPWYQ
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtttcacaccaagaccatcgagagtatcctggagccggtggcccagcagatc
tcccacctggtcatcatgcacgaggagggcgaggtggacggcaaagccatcccggacctg
acggtgccggtggcggcggtgcaggcggccgtcagcaacctggtgcgggtggggaaggaa
acagtccaaaccacagaggaccaggtgatgaaaagagacatgcctcctgcttttattaag
gtggagaactcatgctcgaagctcgtccaggcggctcagatgcttaaagcagatccatac
tctgttcctgcacgagattacctgatcgatggatccaggggtatactttctggaacttca
gacctgctccttaccttcgatgaggcagaggtgcgtaaaataatccgagtgtgtaaaggt
atcctagagtatctgacagtagctgaagtggtggagaccatggaggacctcatcacttac
acgaaaaacctcggaccaggaatgaccaaaatgtcaaagatgattgaggagaggcagcag
gagctgacacaccaagaacacagacagatgctcgtcagctccatgaacaccatcaaagag
ctgttgccggtccttatctcagctataaagatttttgtcacaaccaagagcagtcgaggt
gctggtgtggaggaggcagagaagaaccggaggttcacctttgaaaagatgagtgcagaa
atcaacgagatcatacgagttttacagctcacaacttgggatgaagatgcctgggccaat
aaggatatggaggctttaaagagatctctggctttgattgaatcaaggatggcgcaggct
aaaggctggctcaaagaccctcatggacagccaggggactctggggaggtggcagtgcgt
gtcatactggatgaagccggcaaggtgggagagctgtgtgccgggaaggagaggaaagat
atactcgcgaccactaaagctctggggcaaatgacagacctggtcgcagatctgcgagca
agaggccagggcccgacaccgggatgtgtgcagcgtgcagcccagtgctctcagggcttg
gatttattatttggcaaagtggacaatgctgcgcgccgactggaggctctaatcaatgcc
aagcaggccattgccaggaggctggacgctgcacaggcatggctcgctgatccccacggc
ggccccgagggggaagagaacatccgagcgcttctagctgaggccaaacgcatcgcagat
ctgtgtgaagaccccaaagagagagatgatatcctgcgctccatcagtgagattgcagga
ctcaccgccaggcttgtggagctgcgcaaacagggtaaaggcgacaccccggaggctcgt
gcactggctaagcatattggagcagcactgctgactctgcagtccaaaaccaaccgggct
gtggccaacatgagaccggccaagcctgccgtcaccttggagggcaagatggagcaggcg
ctccgctgggtgaacaacccaggagtggacgacagaggtgtaggccaggcagcaatcaga
gggatggttggggaagggaggaggctggcaggaggcctgctgggcccgtatcgacaggat
atgattggccgctgcgaccgaacagaggcactgatgacatctttggcagatatggcgaac
aggggggaggctgaagctcctcatgcacgagcgacagctgcacaacttcagggtactctc
aaggacctgagacaacacatgcaggaggtgatgacccaggaggtatcggatgtttttagc
gacaccaccaccccaattaagatgctggctgtggctgcaactgccccccccgatgccccc
aacagagaggaggtttttgaagagcgtgcaggaaactttgagacacacgcaggccggtta
ggagcgaccgctgagaaggccgctgccgtgggaaccgccaataaaattacagtggagggc
atacatgctgccgtgaaacacgccagggagctcacaccacaggtgacctccgctgctcgg
atcatgctgaagaatcctggaaacaaagcagcatatgagcattttgacaccatgaagaac
cagtggattgacaatgtggagagactcactggtctggttgacgaagccatcgacacaaaa
tccctgttagatgcttctgaggaggctataaagaaagacattgacaagtgtcgagttgct
atggcaaacgttcagccccaaatgcttgttgccggggcaacaagcattgcgagacgagct
aatcgggtcctgttggtggccaagagggaagttgaaaactctgaagatccacggttcaga
gacacagtgaaacacgcctcagacatcctctcacacactatttcccccatggtgatggac
gcgaaggcagtggctgggaatatacaggataaagctctgcagaaagcttatttggactca
tgtctgaggatcctggctgcagtaggaaaagtgagagaagccttccagcctcaggagccc
gacttccctcctccgcctcctgacctggaccagcttcacgtcagtgatgagcaggctcca
cccaagccccctttgccagaaggtgaagtgcctccacctcggccccctcccccggaggaa
aaggatgaggagttcccggagcagaaggtgggcgaggttctcagcgagcccatgatggtg
gcagccaggcagctgcacgacgaagcgcgcaagtggtcaagcaagcctgaggatgtggag
gcagtagaggagagggatgtagatgatgaagatgagtttactgatggtgaggatgactat
gagccagagctgctgatgatgccgtccaaccagcctgtcaatcaacccattctggcagct
gctcaggctctgcaccaggaggcgcgcaagtggtccagcaagggtaacgatatcatagca
gcggccaagcgcatggctctgctgatggcagaaatgtctcgactggtgcgtggaggaagc
gggaataagcgagccctgatccagtgtgccaaggacatcgccaaggcctcggatgaggtg
acgagactggccaaagaagtagctaagcagtgcaccgacagacgcatcagaactaacctg
ctgcaggtgtgtgagcgaatcccaaccatcagcactcagctgaagatcctgtctactgtc
aaagccaccatgctgggccgaacaaacatcagcgaagaagagtcggagcaggctacggag
atgttggtccataacgcccagaatctgatgcagtcggtgaaggagactgtcagagaagca
gaagccgcctccatcaagatccgcacggatgcaggatgcaccctccgctgggtgcggaaa
accccttggtaccaataa
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