Cololabis saira (Pacific saury): 133464123
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Entry
133464123 CDS
T09849
Symbol
srfb
Name
(RefSeq) serum response factor b isoform X1
KO
K04378
serum response factor
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133464123 (srfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133464123 (srfb)
Transcription factors [BR:
csai03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
133464123 (srfb)
BRITE hierarchy
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
133464123
NCBI-ProteinID:
XP_061602116
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All DBs
Position
17:10993108..11032705
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AA seq
552 aa
AA seq
DB search
MLPSQVGSAPPGSGSAAPGRGVRPVLVRAGGVEVGSGMLAGSRGPRPGSLQPGVHAHVLG
LNPEAAPLCSGSDNDSDSGDEDEPAGSLLGQDGRSRGVKRERADLDAQAAGQDAGAAPGG
YGMVAGGVAGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQV
LLLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPSMDQRMSATGFEE
TDLTYQVSESESMGDTKDTLKPTFTVASLPGSTSNAQSTVPTTSTTMQVSSGPSFPITNY
LAPVSVNSNISANGTVLKTAGGSAGVMQLPGGFTFMPAGTPLPPGTPTIPLSQLQQHSLA
LQGQHGQALAAAPQPQQGQQAVFRFPAAVSLTGAGVPQQLQAIQVHPNTQSSSNSDSSPE
ISHTSTNATTTASLPATIVTSSVPTSVAGHMMYPSPHAVMYASTPALADGGLAVLNAFSQ
GTSAMQVSHAQAQDTGAVPQVFLTAPPGTVQIPVSAVQLHPMVIGQQSSGSSSNLTELQV
VNLDAAQNSKSD
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgttacccagccaggttggatcggcaccacctggaagcgggtcagcagcaccgggcagg
ggggtccggcccgtcctagtccgggcggggggggtggaagtcggcagcgggatgctggcg
gggtcgcggggacccagaccgggcagcctgcagcccggcgtccatgcacacgtgttgggc
ttgaacccggaggcggctccgctctgcagcggctccgacaacgactcggactccggggac
gaggacgagccggcgggctcgctgctggggcaggacggccggagcaggggggtgaagcgg
gagagggcggacctggacgcccaggcggccgggcaggacgcgggggcagcgcccgggggg
tacggcatggtggccggcggggtcgccggggccaagccgggcaagaagacccgggggagg
gtcaagataaagatggagtttattgacaacaagttgaggcggtacaccacgttcagcaag
aggaagacgggcatcatgaagaaggcctacgaactctctacactgacgggaacgcaggtt
ctgctgctcgtggccagtgaaacgggtcacgtctacacgttcgccacgcggaaactccag
cccatgatcaccagcgaaacgggcaaagctctgatccaaacgtgcctcaactcgccggac
tcgccgcctcgctccgacccctccatggaccagcgcatgagcgccacgggcttcgaggag
acggatctcacttaccaggtgtctgagtcagagagcatgggtgacacaaaggacacgctg
aagcccacgttcaccgtcgccagcctgccgggctccaccagcaacgcccagtccacggtg
cccaccacctccaccaccatgcaggtgagcagcgggccctcgttccccatcaccaactac
ctggcccccgtctcggtcaacagcaacatcagcgccaacgggacggtcctcaaaacggcc
ggcggctcggcgggagtcatgcagctgcccggcggtttcactttcatgcccgcaggcacc
cctctcccccccggcacccccaccattcctctgagccagctgcagcagcactccctggcc
ctccaggggcagcatggccaggccctggccgccgccccgcagccccagcagggacagcag
gctgtcttccgcttccctgccgctgtctccctcacaggagcaggagtcccccagcagctc
caggccatccaggtccatcctaacacacagtcctcgtccaacagtgacagcagcccggag
atctcccacacctccacaaacgccaccacaacagcaagtctcccagcaaccatcgtcact
tcgtcggtgccaacgtctgtggcgggtcacatgatgtaccccagccctcacgccgtcatg
tacgcctccacgccagcgctggccgacggagggctggcggtgctcaacgccttctcgcag
ggaacctccgccatgcaggtgtcccacgcacaagcccaggacacaggtgccgtccctcag
gtgttcctcacggcacctccaggcacagtgcagatccccgtctcagcggtgcagctacac
ccaatggtgattgggcagcagtcgagcggcagcagcagtaacctgacggagctccaggtg
gtcaacctggacgcagcacagaactcaaagagtgactga
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