Cololabis saira (Pacific saury): 133464146
Help
Entry
133464146 CDS
T09849
Symbol
cfap43
Name
(RefSeq) cilia- and flagella-associated protein 43
KO
K24223
cilia- and flagella-associated protein 43
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
csai03037
]
133464146 (cfap43)
Cilium and associated proteins [BR:
csai03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
133464146 (cfap43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
WDR55
WD40
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
133464146
NCBI-ProteinID:
XP_061602161
LinkDB
All DBs
Position
17:22701255..22717642
Genome browser
AA seq
1610 aa
AA seq
DB search
MDDVGSLEIRWIQGFTNKNVTFVDTKTVCYTCGAHVCFLNLETGKQSVFQSPGGACVGAL
TADGRTGIFAFSEQKLSPSIFLYGFPELQLKSELIGGTQLDYTSLALSDGGPYLASCSSL
PDYTITVWNWENAVPVCTQPQAGEDVISLVFNPFNWLQLCALGTTSFTVWQIENIANVDV
LKPRVVELPATNGSVVEGRPTSSHDVRDQLQYLVPGMPLSRTTTRATVTPSAICWTTTSE
LYVGCVEGFLLLVDTESLSVSVLFTPTTADAIPELRNCSIEGLTLHESGLMVLGKENMVH
CLQIRGTQLNVTQTWQLERPANTVMLSPDNETLLLSSNEGRMYMLNPTQSDKIVKVLDIF
SGNFVTAALSHTDSNICVSLRDSGELQLWSSDGTCLGSLSVQAQVTSLACCPIAHYAAVG
TTSGDVIFIDLNMAEQPRLVHQVHLYHAAVDHLVFDPEGHYLFTSGSDSFVYILDAKPSR
MFSVMGYAVIPGKVLSLSTQCFRDLDEVKVLALCTGQEDKNEDGSLFKVLSLPTRNLAGS
DCIERHGCLSAHFLKVFTYKVPHPLESCALGISEVFAYCHKKKNLQRFQLPETSISNQEV
VDLQPEQEVKGHPLGPASLLLSPNCLQLASVGRDGLLRIRQTASMEQYIEMQCHSCHLGG
VRSVSFSTDGHTLVTTGVGDGSLVCTTLRIKAVDAVSPSKQCITQSLKSLFSTENPILIN
FPAWSEASPGVSKNTEESQVRGGASVDVTEQDEMYKSQLQSPSLHPTWLESKQQAVIKED
NEHYSDTKKKLRKAIKDLRDTIQKMLRENENLPEEQFNLDVVEQKILKTMVEEEVARTKS
EIAQDIEEKCHRRDVLKRECWDSVTVKGRAIKAFHSGLYVQNYPLKERTEEELEDLRRVH
NIRKLEKPALSSLENTQEENQLEEDHEATSFALTGSFSAQLGYSDPYIYDQFILQTTEQR
NNQIIMLQGVIYRIKTAFNADFEALHRQKVQELKYIGDRNRRIRDIMLELDINQELWEPS
LIDSEWPERVLTVDNSEIKAEKYLTLEQEEEEERRKLEEERQLTAQGDGSREKALDDMMK
GELEVKKVEILKMEIPLPEFALTKPNNHWSEEEKKVYKEYEEKAKALSEEKEKYKRSLEL
EIKRLQESTKDTTENFDETLSKLKGKKGKCTFAIKQEELKIAHLVDSVLKEEELKNQEPE
LKHQLDKTLAHKGETDEEVKRCQDELDKFHEEYDSLVAQDKVLDKDFRKNCFDIQNHPSD
QLYKLFKRRPRTPLCGSLGPNALNQMLNAMEELDAPENMPEGMCPAVWMKLCVARREKVE
SEQKVKTKALTLAQMQACLQRRRQELNSAQQHIENLSKALESLQKERNPQRKNTMVQVIL
KQGQVEASTKDLTPGSTDADLILYHKSVVDKLRGSIRMLAEQKITSMEERKEVHKCIIQL
EWEHRVERNKIEDILDKEKSIKMLRLSEEQQDMTHYNKAQHASRMSDKVSNLEESIALME
KANQRCVEQRMEKIEWINKKADSKERKNATLEQQHPEMQVTVAELRHICEAAAPEDSEAA
ETEERYQEIVQMSNLKDLAGAQEEDLAALWAELERLRMKNFPSLPEMNDN
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgttggcagtttagaaatcagatggattcagggctttacaaacaagaatgtt
acgtttgtggatactaaaacagtgtgttacacgtgcggagctcatgtgtgtttcttgaac
ctggagactggaaagcagagtgtgtttcagagtcctggtggagcctgcgttggtgcactg
acggctgacggtaggactgggatctttgctttctctgagcaaaaactatctccatctata
tttttgtatgggttcccagagcttcagctgaagagtgaattaataggaggcacccagctg
gactacacatctctggcattaagtgatggtggtccttatttggcctcgtgctcctctctt
cctgactacaccataacagtgtggaactgggaaaatgctgtaccagtttgtacacaacca
caagctggagaggatgtcatttctttggtgtttaacccttttaactggctccagctttgt
gcattgggcactacatccttcactgtctggcaaattgagaatattgccaatgttgatgtc
ctgaaaccaagagtagttgagcttcctgcaactaatggttctgttgttgagggacgtcca
accagttctcatgatgttagagaccaactgcaatacttggtaccagggatgcctctatca
aggacgacgaccagagccacggtgactccctctgctatctgctggacaaccacatctgaa
ctctatgtgggctgtgtggaggggtttctgctacttgttgatacagagagcctttccgtt
tcagtccttttcacccccacaactgctgatgccatccctgaactcagaaattgcagcatt
gaaggtttaacccttcatgaaagtggtctcatggttttaggaaaggagaatatggtgcac
tgtctgcagattagagggactcagctcaatgtcacacaaacgtggcaattagaaagacct
gctaataccgtgatgctctcccctgacaatgaaacattacttctgtcttccaatgaaggg
agaatgtatatgctgaacccaactcagtctgacaagatcgtaaaggttctggatattttc
agtggcaactttgtgacagctgccttgtcgcacactgacagcaatatttgtgtgtcactg
agagactctggagaactgcagctgtggtcttcagatggcacctgcctcgggtccctgtcc
gttcaagctcaggtgacaagtctggcctgctgtcctatcgcgcattatgcagctgtggga
acaacgtcaggtgacgtcatcttcattgacctgaacatggctgagcagcctcgtctggtg
caccaggttcatctgtaccacgctgctgtggatcacttagtgtttgatccagaagggcac
taccttttcaccagtggttctgattcatttgtctatatactagatgctaagccctcaagg
atgttttcagtcatgggatatgcagttattcctggaaaggttttgtcactttccactcag
tgcttcagggaccttgatgaggtgaaagtacttgctctgtgcactggacaggaggataaa
aatgaggacggtagcctgttcaaagtgctctcccttccgaccaggaaccttgcaggttca
gattgcatagagcgccatggttgtctttccgctcatttcctcaaagtattcacatataaa
gtgcctcatccactcgagtcctgtgctcttggaatcagtgaagtctttgcttactgccac
aagaaaaaaaaccttcagcgatttcagcttcctgagacaagtatctccaaccaagaggtg
gttgatctgcaaccagagcaggaagtgaaaggtcacccgctgggccctgcctctcttctt
ctgtctcctaattgtttacagttggcttctgttggccgcgatggcttactacgcatcaga
caaactgcctccatggagcagtacattgaaatgcagtgtcactcatgtcatcttggaggc
gtacggagtgtgtccttctccacagatggccacacactcgtcaccacgggcgtcggagat
ggctctcttgtgtgtactactctcaggattaaagctgtggatgcagtttccccgagcaaa
cagtgcataactcagtccttgaagagcttattcagtactgaaaaccccatccttatcaac
tttcctgcgtggagtgaagcatcccctggtgtcagtaaaaacacagaagaaagtcaggtc
agaggtggggcttctgtggatgtaacggagcaggatgagatgtacaagagccaactgcag
tctccatctcttcaccccacctggctggaaagcaaacaacaagcagttataaaagaagac
aatgagcattattctgatacaaagaaaaaactgaggaaagccatcaaagacttgcgtgac
actatccagaagatgcttcgtgaaaatgaaaacctcccggaggaacagttcaacttggat
gtggtggagcagaaaatactcaaaaccatggtggaggaggaagttgcaaggacaaaatct
gaaattgcacaagacattgaggagaaatgtcaccgccgtgatgtcctgaagagagaatgc
tgggattctgtgacagtcaaaggcagggccattaaggcctttcactctggactgtatgtg
cagaactatcctctgaaagagcgaacagaggaagaattggaggacctccgcagggttcac
aatataaggaagcttgaaaaacctgccctgagcagccttgagaacacacaagaggaaaac
cagctggaggaagaccacgaggcaacaagttttgctctgacagggagtttttcagctcag
ttaggatattcagatccttacatctatgaccagttcatcttgcaaaccacagagcagagg
aacaaccagataattatgttacagggcgtgatttaccgcatcaagacagctttcaatgct
gactttgaagcattgcatagacagaaagtccaagaactgaagtatattggggacaggaac
agacgcatcagagacatcatgctggagctggacataaaccaggagctgtgggagcccagc
ctgatcgacagcgagtggccagaaagagtgctcactgtggacaactctgagatcaaggca
gagaagtacctcacactagagcaggaggaggaggaggaaaggaggaagttggaggaggaa
cgccaactgactgcgcaaggcgatggtagcagagagaaagctctcgatgacatgatgaag
ggagagcttgaagtgaaaaaagtggagatcttgaagatggaaatacctctgcctgagttt
gctttgaccaaacctaataatcactggagcgaggaggagaaaaaagtctacaaagagtat
gaagagaaagccaaagccctcagcgaggagaaggagaagtacaaaaggtcattggaactt
gaaataaaaagactgcaggagtccaccaaagacacaacagagaatttcgatgaaacgctc
tcaaagctgaaggggaagaaagggaaatgtacattcgctataaaacaggaagaactcaaa
attgcccatcttgttgattcagtgctcaaagaagaagagctgaaaaatcaagagccggag
ctcaagcaccaacttgacaagacgttggcacacaagggtgaaactgatgaggaggtgaag
agatgtcaggacgagttagacaagtttcatgaggagtatgacagcctggtagctcaggac
aaagttcttgacaaagatttcaggaagaattgttttgatatacaaaatcatccgagcgat
caactctacaagctgttcaaacgtagacccagaacacctctgtgtggttctctggggccc
aatgcactcaaccaaatgcttaatgccatggaggagcttgatgctcctgaaaacatgcca
gaagggatgtgtccagccgtgtggatgaaactttgtgttgcacgcagggaaaaagtagag
agtgagcaaaaggtaaaaacgaaagctttgactcttgctcagatgcaggcatgtcttcag
aggagaagacaagaacttaattctgcccaacagcacattgaaaacctttcaaaagcactg
gagagtttgcaaaaagagagaaaccctcagcgaaaaaacaccatggtccaggtcatactc
aaacagggacaagtggaggcatctaccaaagacctgacacccgggtccacagacgccgac
ttaattctttaccacaagagcgtggtggacaagctcagggggagcatcagaatgcttgca
gagcagaaaattacctccatggaggagcgtaaagaggtccataagtgcataatccagttg
gagtgggaacacagggtggagaggaacaagatagaggacatccttgacaaggaaaaaagc
atcaagatgttacggctctcagaggaacaacaggacatgactcattacaacaaggcccaa
catgccagtcgcatgtccgacaaagtttcaaatttggaggaaagtattgctttaatggag
aaggccaatcaacgatgtgtggagcaacgcatggaaaagatcgaatggattaacaaaaag
gcggactcaaaagaaaggaagaatgccactttagagcagcagcatcctgaaatgcaggtg
actgtagcggagctgagacacatctgtgaagcagcagctcctgaagacagtgaagcagct
gaaacagaagagcgttaccaggagattgttcagatgagcaacttgaaggaccttgccggg
gcacaggaggaggacctggctgccctctgggcggaacttgagcgtctgaggatgaagaac
ttcccttcactccctgagatgaacgacaactaa
DBGET
integrated database retrieval system
