Cololabis saira (Pacific saury): 133464366
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Entry
133464366 CDS
T09849
Symbol
srsf5b
Name
(RefSeq) serine and arginine rich splicing factor 5b
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03040
Spliceosome
csai05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133464366 (srsf5b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133464366 (srsf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133464366 (srsf5b)
Spliceosome [BR:
csai03041
]
Common components
Common spliceosomal components
SR proteins
133464366 (srsf5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
SET_assoc
DUF7376
Motif
Other DBs
NCBI-GeneID:
133464366
NCBI-ProteinID:
XP_061602246
LinkDB
All DBs
Position
18:complement(9637892..9644929)
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AA seq
299 aa
AA seq
DB search
MSGCRIFIGRLSPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGGGGGGGGRFSDRYGRGSQNSRSRNPPPMRTENRLIVE
NLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNALDKLSGKEINGRK
IKLIEATKRRSRSRSRSESSSRSRSRSRGRSQSRSPRRSRTPTKDHHRSRSRSRSRSRSG
SPAGGASPKSKETNKRKSSKSVTPSSPPPAQRASMSRSRSRSRSRSRSRSRSPSTDSQR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatgtcgcatcttcatcggccgcctgagcccctcggcgagggagaaggacgtg
gagaggttctttaagggctacggccggatccgagacatcgacctgaagagaggcttcggc
ttcgtggagtttgatgatcccagagatgcagaagatgctgtgtatgagcttgatggcaaa
gagctttgcaatgaaagggtgaccattgagcatgctcgtgtccgcctgcggggcgggcgt
ggccgcggtggtggaggtggtggtggaggacgtttttctgatcgctatggacgaggctcc
cagaacagtcggagccgaaatcctcctccaatgcggactgaaaaccgcctgattgtggag
aacttgtcctcacgagtcagttggcaggacctgaaagatttcatgagacaagctggagag
gtgacattcgcagacgcacaccggcccaaactcaacgaaggggtcgttgagtttgcctct
tacagtgatttgaaaaatgcccttgacaaattgtctggaaaggaaatcaatggcaggaaa
atcaagctcattgaagctactaaaaggaggtctagaagtcgctcccgctcggagagctcg
tcccgctctcggtcccgttcccgcggtcgctcccagtcccgctccccccggcgctcccgc
accccgaccaaagatcaccaccgctcgcgctcccgttcccgctcccgctcccgcagcggc
tcgcccgccggaggagcttcccccaaatccaaggagaccaacaagcgcaagtccagcaag
tctgtcactccatcctcccctccgcccgcgcagagggcctccatgtcccgctcccgttcc
cgctcacgctcccgttcccgctctcgctcccgctctccctctacggacagtcaacgctaa
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