Cololabis saira (Pacific saury): 133464519
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Entry
133464519 CDS
T09849
Symbol
taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X1
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csai03021
]
133464519 (taf1a)
Transcription machinery [BR:
csai03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
133464519 (taf1a)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1_subA
DUF3482
COG4_N
Motif
Other DBs
NCBI-GeneID:
133464519
NCBI-ProteinID:
XP_061602530
LinkDB
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Position
18:20193816..20203531
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AA seq
410 aa
AA seq
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MDDWTADLEVDVICSDDDSTRRGKSLKLPLVKPVCAKRKSGYGFHQSCRMCLEKIREAML
HHRWQEAAEYMACCSQILECKSEYRVPPNKVLIRRISTEILHHHPNTTMEDYNVVYERMK
HSGFKHYLMISLEHAFHLMLHGKIKDAKQKLCDAEGWKYGKESAIQIQNTRLIQAYRSLL
DYIIWCDTKSSLSNKDYFDMQNALNSFRKASVNLKEILKHPGVWDPFILSYVDMLEFYQD
HDEALKVLTDYALDENFPPNPNAQVYLYRYLKQHDAPQKKQMKVLKNLHSLVPSHELMLD
YISYLLQAEKKASAQKALAVILEMLDFACWRTNLDLWRSLQGVIQKLQMEDNFESIVRET
MASRKDWWYALHFTSFHGRKDSKENPELLEVKASLAKILCPDRELKYAAE
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggacgactggactgctgacttggaggtcgacgttatatgctcagatgacgattctaca
aggagaggcaaaagtttgaagctccctctggtcaaacccgtgtgtgccaagcggaaaagc
ggatatgggtttcaccagagctgcagaatgtgtctggagaagatcagagaagccatgctg
catcacagatggcaggaggcagcggagtatatggcgtgttgctcccaaatattagagtgc
aaatctgaatacagagtaccacccaataaagtgcttattcggagaatcagcactgagatt
cttcaccatcatcccaacacaacgatggaagactacaacgtcgtctatgaacgtatgaag
cattcaggatttaaacattacttgatgatttctctggaacacgcgttccacctgatgctc
cacggtaagatcaaagatgcaaagcagaagctgtgtgatgctgaaggctggaagtacggg
aaggagtcagccattcagattcagaacactagactgatccaggcctacaggagtttactg
gattacatcatctggtgcgacacaaagagcagtctctctaacaaggattattttgacatg
caaaacgcacttaattccttcagaaaagcctctgtcaatcttaaggagattttgaaacat
ccaggtgtttgggatcccttcatcctgagttatgttgacatgctggagttctatcaggat
cacgatgaggctctcaaagtcctaactgactatgcattagacgagaatttccccccaaat
ccaaatgcacaagtctacctgtaccggtacctgaagcagcacgacgctcctcagaagaaa
cagatgaaggtgctaaagaacctccattcattagtccccagtcacgagttgatgctggac
tacatttcctacctgcttcaggcagagaaaaaagcgagcgcccagaaagctctagcagtc
attttggaaatgctggacttcgcttgctggaggaccaacctggacctgtggaggagtctg
cagggtgtgattcagaaactgcagatggaagataactttgagagcattgttcgtgagaca
atggcttcaagaaaagactggtggtatgcgctgcacttcacaagctttcacggcagaaaa
gactccaaggagaaccccgagcttttggaagtaaaggcatcgctggcaaaaatcctctgt
ccagatcgagaactcaagtacgctgctgaataa
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