Cololabis saira (Pacific saury): 133464549
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Entry
133464549 CDS
T09849
Symbol
stxbp5a
Name
(RefSeq) syntaxin-binding protein 5a isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133464549 (stxbp5a)
Membrane trafficking [BR:
csai04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133464549 (stxbp5a)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
133464549 (stxbp5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Lgl_C
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
Synaptobrevin
VPS8_N
WD40_like
CFAP43_N
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
133464549
NCBI-ProteinID:
XP_061602582
LinkDB
All DBs
Position
18:23663670..23801371
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AA seq
1141 aa
AA seq
DB search
MKKFNIRKVLDGLKEASCSAPSVQVGPQENHLIQETLQSDHFQLCKTVRHGFPYQPSSMA
FDPVQKILAIGSQGGALRLFGRPGVECYCQHESGAAVIQLQFLINEGALVSALADDTVHL
WNLRQKRPAILHSLKFNRERITFCHLPFQSKWLYIGTERGNIHIVNVESFMLSGYVIMWN
KAIELSSKAHPGPVVHISDNPMDEGKLIIGFESGIVVLWDLKCKKADYRYTHDEAIHSVA
WHHEGKQFICSHSDGTLTIWNVRGQGKPIQTITPHGKQPKDGKKPEPCKPILKVEYKTTR
NGEPFIIFSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPYA
VVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYFADCPVDLIPALYSVGSRQK
RQGYSKKEWPISGGNWGQGTQSYPEMIITGHADGTVKFWDASAIMLQVLYKLKTAKVFDR
NRSKEDKGSTEISDEDPFAIQIMAWCPESRMLCVAGVSANVIIYRFSKLEVTTEVVQLLE
VRMQYELNETDSPEGGGYGGEQTSAHHTPGASPQTSGPPSHPSTSSNNSDGGNMPCLKVR
STPLKQSPGYQVDLVVQLVWVNGEPPQPITSLALNSSYGLVVFGNSNGLAVVDYVQKTVV
LNLGTLELYGSGDPYQRQPRSPRKTRQPSGGLCDINEGSATSEDRCKSPTSVLMSNSNLQ
QFYNGGGRGAKMSRKLSLPTELKPDLVLLSVCPPRGGNPLDHRDNSFSRSRSSSVTSIDK
EAREYVNSFHFCETFTRKGDSTLTPCLYVGTSVGAVLALAVTLPPAGEQRQLQPVIVSPV
GMLVRLKGSIMRMAFLDSTGALLPPAHEPWYEPNITADGEEKVRKRRPVSVSPSTSQDLS
ESQYAVVCSEKQAKVMSLPSQTCIYKHNITETSFILRSDVVQMSQGVCVACFCANGHIMT
LSVPGLRPLMDVNYLPLTDMRIARTFCFTNLGQAMYLCSPTEIQRITYSQDTCENLQELL
GELFTPVETPEAPNRGFFKGLFGGGAQSLDREELFGEIAAGKASRSLAQHIPGPGGIEGM
KGAASGVVGDLARARIALDERGQKLGELDERTAAMMASADSFSKHAHEMMLKCKDKKWYQ
F
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaacatcaggaaggtgctggacgggctgaaggaggcgtcctgctccgcg
ccgtccgtccaagtggggccgcaggagaaccatctgatccaggagacgctccagtccgac
catttccagctctgcaagactgtccgtcatggcttcccctatcagccgtcgtccatggcg
ttcgaccctgtgcagaagatactggccattggatcccagggtggagctctcagattattt
ggtcgtcccggggtcgagtgttactgtcagcacgagagcggagcagccgtcatccaacta
cagtttctcatcaacgagggcgcgctggtgagtgctttggctgacgacaccgtccacctg
tggaacctgaggcagaagagaccagccatcctccactccctcaagttcaacagagagaga
ataacgttctgccacctgcccttccagagtaaatggttgtacatcggcaccgaacgaggg
aacatccacatcgtcaacgtggaatccttcatgctctcaggctacgtcatcatgtggaac
aaagccattgaactgtcctccaaagctcatcctggaccggtagtccacataagtgataac
cctatggatgagggaaagcttataattggattcgagtctggcatcgtggtcttatgggat
ctgaaatgcaagaaggcagactatcgctacactcatgatgaggctatccactcagttgcc
tggcatcacgagggcaagcagttcatttgcagtcactcagatggaaccctgaccatatgg
aacgtgaggggccagggcaagcccatacagacaatcacaccgcacggaaaacagcccaag
gacgggaagaagccagagccttgtaaacccattcttaaagtggagtacaaaacaactaga
aatggggagccgttcataatcttttctggtggtctttcttatgacacggtgggccggagg
ccttgtttgactgtaatgcatgggaagagtactgccgtactggagatggactatcccata
gtagacttcctcacgctatgcgagactccctatcctaacgattttcaagagccttacgcc
gtggtggtccttctagagaaagatttagtagtgattgatcttgcacaaaatggttacccc
atatttgaaaacccatatccgctgactatccacgagtctcctgtgacctgctgcgagtac
tttgccgactgccctgtggacctcatacctgcactttactctgttggctcaaggcagaaa
cgacagggatacagcaaaaaggaatggcctattagtggtggaaactggggtcaaggcaca
caaagctacccagagatgatcatcactgggcatgctgatggaactgtgaagttctgggac
gcttctgcaataatgctccaggtgctctataagctaaaaacagccaaggtgtttgacaga
aaccggtctaaggaagacaaaggcagcaccgagatatcagacgaggatccctttgccatt
cagattatggcttggtgccccgagagcaggatgctgtgtgtggccggtgtgtcagccaac
gttatcatctaccgcttcagcaagctggaagtaactaccgaggtggtgcagttactagag
gtgcgaatgcagtatgagctgaacgaaacagactctccagaaggcgggggctatgggggc
gagcagacgtcggcgcatcatacccctggcgcctcgcctcagacgagcggcccaccttca
cacccttccaccagcagcaacaactctgacggaggcaacatgccctgcctcaaggtgcgc
agtactcctttgaagcagtctccaggttaccaggtagatttggtggtccagttggtgtgg
gtgaacggagagcctcctcagccaatcacaagtctggcactcaactcttcctacggctta
gtggtgtttggcaacagtaacggtctggcggtggtggactacgtccagaagacggttgta
ctcaacctggggacgctcgagctttatgggtccggcgacccctaccagcgacagcctcgg
tcgccaagaaaaacacgacaaccttcaggaggtttgtgcgacatcaacgagggctcagcc
acatccgaggaccgctgcaagtctcctacttcagtgttgatgtcaaacagcaatctacag
caattctacaatggaggtggtagaggagcaaagatgtcacggaaattaagcttgcctact
gagcttaagccagacttggtcctcctgtctgtatgcccaccacggggtggcaacccttta
gatcaccgggacaactccttcagccgctcacgctcctccagcgtcaccagcatcgacaaa
gaagcacgagagtacgtcaattccttccacttctgtgagacctttacccggaagggggac
agcactctgacgccctgcctgtatgtgggaacgtccgtgggagctgtgctggctctggca
gtcacattgccccctgctggggagcagcggcaactgcagccggttatcgtatcacctgta
ggtatgttggtacggctgaagggaagcatcatgcggatggccttcttagactccacaggt
gccctcctgcctcccgcacacgagccttggtatgaacccaacattacagcagacggtgaa
gaaaaggtccgtaagcgccggcccgtctccgtatccccatccacctcccaggacctcagt
gagagccagtatgctgtggtgtgctctgagaaacaggccaaagtcatgtccctcccgtcc
cagacgtgcatctataaacacaacatcacagagacctccttcatcttgcggtcggatgtc
gtgcagatgagccaaggcgtctgtgtcgcttgtttctgtgccaacggccacatcatgact
ctcagtgtgccgggactgagaccgctcatggacgtaaactacctacctttgacggatatg
cggatagcaaggacgttctgcttcaccaacctgggtcaggccatgtacctttgctccccc
accgagattcagaggatcacttacagtcaggacacttgtgaaaacttacaggagctcctg
ggtgaacttttcacaccagtggagacacctgaggcgcccaacagaggcttcttcaaaggc
ctctttggaggcggagctcagtcgctggacagagaggagctttttggcgagatagcagct
ggaaaggcatctcgaagtctggcccagcacatccccggccctggtggaattgagggcatg
aagggagctgcttctggagtggttggagacctggcacgcgcccggatagcgttggatgaa
agaggccagaaactgggtgagctggatgagaggacagccgccatgatggccagtgctgat
tctttttccaaacacgcccacgagatgatgctgaagtgcaaagacaaaaaatggtaccag
ttctga
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