Cololabis saira (Pacific saury): 133464847
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Entry
133464847 CDS
T09849
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2-like
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
csai00536
]
133464847
Glycosaminoglycan binding proteins [BR:
csai00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
133464847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEA
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
133464847
NCBI-ProteinID:
XP_061603018
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All DBs
Position
18:42337767..42395780
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AA seq
2126 aa
AA seq
DB search
MLGTAGLVLLLAAASTAAGIRGGSIRTDPGLRTDPGLVPETSSSLMDLLKASGSSRSSSL
ASGSSRRSALASSSGRSRRSVFLQSGVRICPQESLEEVLASHQNYYQLRVCQEAVWEAFR
IFLDRIPGTSEYQRWVHVCQQESLCISDLARNFSSSEEHLSLITRRINRIKDRQPPSRVV
VTPVPAQKLPEVAGPAAELTTAPANSDIIASPAPPGTPQEPVQDSELLNVSVLRDGELPN
AVPESLMVHVVEFSIDLVDPSYRELLDDPDSPQYVDLAQHLQDQMLHVFDKLPGFKSISV
LGISERQDAGGSEGISVHFSLVFENHHPRSNPETSANPETSANPETSANRSSANSRLQEL
VAEALHEETSLPLDLDSLNFQPEVIVLPVLTTSSVEVVPESSEPDSHNEFEVLIKEAEMD
ESQPSVPLPPPEKENSLVTLLDSTPVAGEETDSTPVPDQETDSTPVPDQETDSTPVPDGN
PGETSDSTPVPDGNPGGTNGATPSGDDLPPLDVNDESKESNPEQEEEEPIIITHEIETIH
VDETGELVRDYVPTPTVVLETVSSDTTLSPNLLPEEDLTPVDEQREHPGIDLIPVTPTME
PAELQQDQDHNALPDEENSDLDVLQPHEPEDDKFLEALQPEPEEVDVSEPVEENTEITEP
DEGTVEILEPEVGTVEILEPDEGTVDEGTVEILEPDEGTVEILEPDEGTVEILEPEVGTV
EILEPEEETVEILEPEVGTVTILEPEVKIVTLLDPDEDVEEFPQSAEEVPADSGNHEKDL
EVSETNDSSEPSETEKEVVELSNPDEGISEVSDETITEETQPEVSEETEVSEETEVSEET
EVSEETEVSEETITEVSEETEVSEETITEVSEETEVSEETEVSEETITEVSEETEVSEET
EVSEETITEVSEEIEVSEETEVSEETEVSEETEVSEETITEVSEETEVSDETEVSEETEV
SEEIEVSEETEVSDETEVSEETEVSDESEVPEETEVSKENEVSEETEVSEETEVSEETEV
SEETITEVSEETEVSEETEETEVSEETEVSEETITEVSEETEVSEETEVSEETEVSEETE
VSEEIEVSEETEVSEEIEVSEETEVSEETITEVSEETEVSEETEVSEETEVSEETEVSEE
IEVSEETEVSEEIEVSEETEETEVSEETVPEVSEETEVSEETEVSEETEVSEETLPEVSE
ETEVSEETVPEVSEENEVPEETEVSEETEVSEETITEVSEETEVSDETEVSEETEVSEET
ITEVSEETEVSDETEVSEETEVSEETITEVSEENEVSEETEVSEETEVPEETEVSEETEV
SEETEVSEDTITEVSEETEETEVSEETEVPEETEVSEETEVSEETEVSEETEVSEETEVS
EETEVSEETEVSEETVPEFSEETEVSEETEVSEEAVPEVSEETEVSEETEVSEETEVSEE
TEVSEETITEVSEETEVSEETITEVSEETEVSEETVPEVSEETITEVSEVSEETEVSEET
VPEVSEETLPEVPEVSEETITEVSEETVPELSEGTVLEVPEVSEETEVSEETEVPEETEV
SEETEVSEETEVSEEIEVSEETEVSEETEVSEETEVPEETEVSEETEVPEVSIVHFLETL
PEEETVERLELEPEKDLTVPPAESIDVLQDLDEGLDSEDLDSEDLDSKDLDSEDLDSKDL
DSEDLDSEDLDSEDLDSGREENMDYGYLDSGDLDWEDLDSEDLNSGGETENSPEDQNSIT
DVLEERTAAVVTATDTTESDDHLETSDQADLHLETSDPADLPLETSDPADLPLETSDPEV
TTADEQDISEGTEVDEETENIVNADPTLPTAGLSSADVSVNPTGDSGLLEIEQESINPAS
DGSPVEDGTEQEEPMEEEEPEEEPESSTRTPEPEEEVIVLEVPGDLDQTSVAPTEEPERS
TVSFTDAPPPPYLTTPTMTAAGHGQELVVFFSLRVTNMNFSEDLFNRTSSEYRSLENTFL
DVLLPFLQANLTGFQKLEILNFRAGSVVVNSKMKFSTVVPYNVTEAVHCVLEEFCQSAAR
NMQIQIDTRSLDVEPGDQADPCKFQACDEFSRCSVNSWTKEAECRCRPGFLSVDGRPCRS
VCELQPDVCRGRGECEVEPGRGAVCR
NT seq
6381 nt
NT seq
+upstream
nt +downstream
nt
atgctgggaaccgccggcctggtgctgctgctagccgccgcctcaacggcagctggaatc
agaggcggcagcatcagaacggacccgggactcagaacggacccgggactcgtaccggag
acctccagctccctgatggatctgctgaaggcgtccggcagcagcagaagctcatcttta
gcgtccggcagcagcagaaggtcagcgttagcgtccagctccggtcgatccaggaggtcg
gtgtttctccagtccggagtgaggatctgcccccaggagagtctggaggaggtgctggcc
agccaccagaactactaccagctacgagtgtgccaggaggccgtctgggaagccttcagg
atcttcctggaccggatcccggggacgtcggagtaccagagatgggtccatgtgtgtcag
caggagtcgctgtgcatctccgacctggccaggaacttcagcagctccgaggaacatctg
agtctgataaccaggaggataaaccggatcaaggaccgacaacctccatctcgagtcgtg
gtgactccggttccggctcagaagctcccggaggtcgcaggtccagctgccgagctaacg
actgctccggctaactctgacatcattgctagccccgcccccccgggaaccccccaggaa
cctgtacaggactcggagctcctcaacgtctccgtcctccgggacggagagctgcccaac
gcggtgccggagagcctgatggtgcatgtggtggagttcagcatcgacctggtggatccg
agctaccgggagctgctggacgacccggactcgccccagtacgtggacctggcccagcac
ctgcaggaccagatgctgcatgtttttgacaaacttccaggatttaaatccatcagtgtt
ctggggatcagcgagaggcaggatgctggagggtctgagggaatctccgtccacttctct
ctggtgtttgagaatcatcacccccgatccaacccggagaccagcgccaacccggagacc
agcgctaacccggagaccagcgctaaccgttcgtccgctaactccagactccaggaactg
gtggccgaagctcttcatgaggagacgtctctgccgctggatctggactccctgaacttc
cagccagaagtcatcgtcctgccagtgctgacaacctcctcagtagaagtagtgccagag
tccagcgagccggattcccacaacgagtttgaagttttgatcaaagaagcagagatggat
gaatctcagccgtcggttcctcttccccccccggagaaggagaactcgctggtgactctg
ctggactccacaccggtcgctggcgaggagacggactccacgccggtccctgaccaggag
acggactccacaccggtccctgaccaggagacggactccacaccggtccctgacgggaat
ccaggggagacaagtgactccacgccggtccctgacgggaatccaggggggacgaatggg
gcgacacccagcggtgatgatctaccgcctctagacgttaacgatgagtccaaagaatcc
aatccagagcaggaagaagaggaaccgatcattatcacacacgaaattgagaccattcac
gtggatgaaaccggagagctggtgcgggactacgtaccgacgcctacggtggttctggag
acggtttcctcggatacgactctgtctcccaacctgctgccagaagaagacctgactccc
gtcgatgagcagagggaacatcccggtattgatctgattcctgttactccaaccatggag
ccggcagaacttcagcaggaccaggaccacaacgctcttccagatgaagagaactcagac
ctggacgttctccaacctcacgaacctgaagacgacaagtttctggaagctttgcaaccg
gaacctgaagaggtcgacgtttctgaaccagtggaagaaaacacagagataacggaacca
gatgaaggaaccgttgagatattagagccagaagtaggaaccgttgagatcttagaacca
gatgaaggaaccgttgatgaaggaaccgttgagatcttagaaccagatgaaggaaccgtt
gagatcttagaaccagatgaaggaaccgttgagatcttagaaccagaagtaggaaccgtt
gagatcttagaaccagaagaagaaaccgttgagatcttagaaccagaagtaggaacagtt
acgatcttagaaccagaagtaaaaatagttacgctcttagatccagatgaagatgttgag
gaatttccacagtcggctgaagaagttcctgcagattcaggaaaccacgagaaagatcta
gaagtttcagaaacaaacgactcatcagaaccttcagagacagaaaaagaagttgttgaa
ttatcaaatccagacgaaggaatatctgaagtttctgacgaaacaataaccgaggaaaca
caacctgaggtctctgaggaaactgaggtctctgaggaaactgaggtctctgaggaaact
gaggtctctgaggaaactgaggtctctgaagaaacaataactgaggtctctgaggaaact
gaggtctctgaagaaacaataactgaggtctctgaggaaactgaggtctctgaagaaact
gaggtctctgaggaaacaataactgaggtctctgaagaaactgaggtctctgaggaaact
gaggtctctgaagaaacaataactgaggtctctgaggaaattgaggtctctgaagaaact
gaggtctctgaggaaactgaggtatctgaagaaactgaggtctctgaggaaacgataact
gaggtatctgaggaaactgaggtctctgatgaaactgaggtctctgaggaaactgaggtc
tctgaggaaattgaggtctctgaggaaactgaggtctctgatgaaactgaggtctctgag
gaaactgaggtctctgatgaaagtgaggtccctgaggaaactgaggtctctaaggaaaat
gaggtctctgaagaaactgaggtctctgaggaaactgaggtctctgaagaaactgaggtc
tctgaagaaacaataactgaggtctctgaagaaactgaggtctctgaagaaactgaggaa
actgaggtctctgaggaaactgaggtctctgaagaaacaataactgaggtctctgaagaa
actgaggtctctgaagaaactgaggtctctgaggaaactgaggtctctgaggaaactgag
gtctccgaggaaattgaggtttctgaagaaactgaggtctctgaggaaattgaggtctct
gaggaaactgaggtctctgaagaaacaataactgaggtatctgaagaaactgaggtctct
gaagaaactgaggtctctgaggaaactgaggtctctgaggaaactgaggtctccgaggaa
attgaggtttctgaagaaactgaggtctctgaggaaattgaggtctctgaagaaactgag
gaaactgaggtctctgaggaaacggtacctgaggtctctgaggaaaccgaggtatctgaa
gaaactgaggtctctgaggaaactgaggtctctgaggaaactctacctgaggtctctgaa
gaaactgaggtatctgaagaaacggtacctgaggtctctgaagaaaatgaggtccctgag
gaaactgaggtctctgaggaaactgaggtctctgaagaaacaataactgaggtctctgag
gaaactgaggtctctgatgaaacggaggtctctgaggaaactgaggtctctgaagaaaca
ataactgaggtctctgaggaaactgaggtctctgatgaaacggaggtctctgaggaaact
gaggtctctgaagaaacaataactgaggtctctgaggaaaatgaggtctctgaagaaact
gaggtctctgaggaaactgaggtccctgaagaaactgaggtctctgaagaaaccgaggtc
tctgaggaaactgaggtctctgaagatacaataactgaggtctctgaggaaactgaggaa
actgaggtctctgaggaaactgaggtccctgaagaaactgaggtctctgaagaaactgag
gtctctgaggaaactgaggtctctgaagaaactgaggtctctgaggaaactgaggtctct
gaagaaactgaggtctctgaagaaactgaggtctctgaagaaacggtacctgagttctct
gaggaaactgaggtctctgaggaaactgaggtctctgaagaagcggtacctgaggtctct
gaggaaactgaggtctctgaagaaactgaggtctctgaagaaactgaggtctctgaagaa
actgaggtctctgaggaaacgataactgaggtctctgaggaaactgaggtctctgaggaa
acgataactgaggtctctgaggaaactgaggtatctgaggaaacggtacctgaggtctct
gaggaaacgataactgaggtctctgaggtctctgaggaaactgaggtctctgaggaaacg
gtacctgaggtctctgaggaaacactacctgaggtccctgaggtctctgaagaaactata
actgaggtctctgaggaaacggtacctgagctctctgaaggaacagtacttgaggtccct
gaggtctctgaggaaactgaggtctctgaagaaactgaggtccctgaggaaactgaggtc
tctgaagaaactgaggtctctgaggaaactgaggtctctgaggaaattgaggtctctgag
gaaactgaggtctctgaggaaactgaggtctctgaagaaactgaggtccctgaggaaact
gaggtctctgaggaaactgaggtccctgaggtctctatcgttcatttcttagaaactctt
ccagaagaggagaccgttgagaggttagaacttgaaccggagaaggatcttacagttcca
ccggctgaatcaatcgatgtccttcaagacctggatgaaggtctggactctgaagatctg
gactctgaagatctggactctaaagatctggactctgaagatctggactctaaagatctg
gactctgaagatctggactctgaagatctggactctgaagatctggactctggaagggaa
gaaaatatggactatggatatctggactctggagatctggactgggaagatctggactct
gaagatctgaactctggaggggaaactgaaaactcacctgaggaccagaactccatcact
gacgtcctggaggagagaactgctgctgtcgtcacggcaaccgacacaaccgagagtgat
gatcacctggaaacatctgaccaggctgatcttcacctggaaacatctgacccagctgat
cttcccctggaaacatctgacccagctgatcttcccctggaaacatctgacccagaagtg
acgactgcagacgagcaggatatttcagagggaactgaagtcgatgaagagacagaaaac
atcgtcaacgccgacccaacactcccaacggctggtctctcctcggctgatgtttcagtc
aacccaactggagattctggactcctggagatagaacaggaatccataaatccagcttct
gatggttctccggtggaggacggaaccgagcaagaggagccgatggaggaggaagaacca
gaggaggaacctgaaagcagcaccaggacaccagaaccagaggaggaagttattgtgttg
gaggttcctggtgacctggaccagactagcgtagcaccaacagaggaaccagaacgtagc
accgttagcttcacagatgccccgccccctccgtacctgaccacgcccaccatgacggcg
gcgggtcacggccaggagctggtcgtcttcttcagcctgagagtcaccaacatgaacttc
tctgaagatctcttcaacaggacgtcgtccgagtaccggtccctggagaacaccttcctg
gacgtgctgctgccgttcctgcaggccaacctgacgggcttccagaagctggagatcctg
aacttccgggccggcagcgtggtcgtcaacagcaagatgaagttctccacggtggttccg
tacaacgtcactgaggccgtccactgcgttctggaggagttctgccagtcggcggcccgg
aacatgcagatccagatcgacacccggtccctggacgtggagccaggcgaccaggccgac
ccctgcaagttccaggcgtgtgacgagttttcccgctgcagcgtgaacagctggacgaag
gaggccgagtgtcggtgccggccgggtttcctgtcggtggacgggcgtccctgtcgcagc
gtctgcgagctgcagccggacgtctgccggggacgaggggagtgtgaggtggagccggga
cggggagccgtctgcaggtga
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integrated database retrieval system
