Cololabis saira (Pacific saury): 133464906
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Entry
133464906 CDS
T09849
Symbol
rev3l
Name
(RefSeq) DNA polymerase zeta catalytic subunit
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
133464906 (rev3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csai03400
]
133464906 (rev3l)
Enzymes [BR:
csai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
133464906 (rev3l)
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
133464906 (rev3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
POL3_N
REV3_N
zf-C4pol
DNA_pol_B_exo1
Motif
Other DBs
NCBI-GeneID:
133464906
NCBI-ProteinID:
XP_061603090
LinkDB
All DBs
Position
18:2466731..2563900
Genome browser
AA seq
2867 aa
AA seq
DB search
MFAVRLVSADYYLARPGPLDVLWSEFRGSAVSAVPVVRIFGATPAGQKTCLHLHGVFPYI
YVPYDGAGQQPERYLRQVAFSIDRALNVAMGNPASSAQHIFKVVLVSGMPFYGYHAQEKH
FMKIYLYNPRMVKRVCELLQSGAVMNKTYQPHEGHIPYLLQLFIDYNLYGMNLVHLSAVK
FRRSQSKDGDQTASSCRPGNSPWKSPCTSKLSSSSALGGSAVRWDENALPCSLVLEEVGR
QSTCELEVDAVAVDVLNRLDIENQIGRNPGLQAIWEDEKQRRREADRSSQIEPPESQDRG
SVASTESEKVFMKRVKEILKDNELDTTQDLSVDEDAEEFSGDLTLHPDPPAPDALPCTPA
NAVEKHRDAQPDCVRSSGKVADEAVVDEEAILGLLESTQTFLPFSQTSNHPPLLDGSQDY
TLVDLLAGLEDDGFHGPPAPQSSQSGSRGYHCNSDEEEASPELDQEEAELSAVMSQRWDA
ERPGSSTLRRGLKEAEDGDTDDHQESSDEDMEWSGNSLFANLSIPQLDGAADESSDSSLT
DSGSMSQSSLMGSRNPFAGETVHLEPPSPTKILVECQHPELRAAHALDSDPPRDKLLDGG
SECSAGFKLNTELPYILPVKHPTPCKVASHPEVPPIGMDKEDIRPLYPYDKKTSLPLDET
ELEGFPFGPGKNRKRYGGMTSVETNRLSIVQNCRTFSLCYSELRNCSAKTDMDLSPGVDA
APSPSREDEFLDPRGDHMGQNSEEGDVGELKIRYEDYQENKTERTIVAQQEAHYKFFPSV
ILSNCLGRKKAGGKKPGGDPGSRPELSPSRRAKLKAGRKRLGMAGPRSRGTPGLDGSTSE
SSPAPADGDEPETRARPTEEPSVEAEPVLAEETEPDPQNSAADCSLPEEPRDSEGQLTPA
PEPPPATLGGTKPSPALPGSKYTLRAKRKMNYDGEEGDPPGSSCPKTQGSAKDRPKGGAA
PSGPEPKYQKRRKKEPPVIIKYIIINRFKGQKNMLVKMSKVSAEEPLVLLTPEKLEQYCK
RAPLKDFWPMVPESPAAVFPVSEPKARKQAKRKVKVKVSSAGKKTPDKAAAKPRIKRAKR
VKKAGSGPRGPVLGPVRPSLPPPGPCYGELADDHDRSYADVMVELGYLSDRSCSPAECTP
PRCWSPSAPLADTGPEPLGDPSLSDPRLSSASHKPQRRRPATTQRRRSSKSGAGPPEPPE
PPGERPRKRGAAPKQAKRAQSPKTPAKPRRPGKKRTSQLKGHDPGQDPPQDGSAPSQGSP
SQRPPGQDQGGQGGSQTAPGPRSVRPKVEDCETSIMEVNQSLPAPAQTKQQGCQTAAVKL
EASQDKCSASPPYAPPHPGPQNGQPPPLPGASSGLAVLKQLLQKRHQGRALPLQVVGGDG
HAASTPAQSRRAPSTSPRKPRAPRSAVPKDKRPRSRKVKRSSTQPTPSVKQDGHASDDCP
FFLSDPELDSCTFIEDSLSPELPHSYTFDINTIHQADFSSPYSGSQFVLTDKHLPLKFLS
DVSHEAGEPPQNQQSSSQRGPEGVGPASPDLFHRSQDGEQTWGREPAGSDGLELPFSQSH
VSSPFQDFHCERKELLFSALDPVLPLPLSSVSLVEHEGSPSSELDGLTSTTPSSSPRSVC
SLSQGRAGQLQRGPAGGAHILKPLMSPPSHDEILSTLQDLDMSEATFLEPFCSDPADVPE
KPREVGGRKLTVGSRLVQDLAEFSGDLSLEGLRFWKTAFAAMTNPAGVAPSSPGAGGAPD
PPLHPQLHPPSASNRKVVLLPCRIPPSQQRVQLWLEARKQYESLQRGRREVNLEEGDPRR
AEPPQQNRNLSGVRTPRRKKLNLSLIISPLAKPGSPCPSTEASPVSDLGSAAPDEVPETP
SPESPELPPWQPSSSDPGRPGTRPAESSAEPRPSGVSGPQGGPGGPCSPCSPRSPSSLCD
SDGEDQGLLHSTPFLSRRRRCKEDPDPLCSTPIAGDDPVAERLQQRRRSQADPLRRVLLT
TQMKNQFAALKVPKKDDSQIEGPSIADSYGFKVSMQNLQDAKALHEVQHLTLMSLELHAR
TRRDLEPDPEFDPICALFYCLSSDALLPGDGGQDGGARLTGAIVVDQDHGGHGPGCSETA
PLLVRSGVSGLRVTYAAEEKVLFEELVAVVRRLDPDILVGYEVQMRSWGYLLQRGAVLGV
DLCQQLSRVPGDSKENRFSAERDEYGADTMTEINIIGRVTLNLWRVMKSEVTLNNYSFEN
VAFHVLHQRFPLYAPRTLSDWFDHKTHLHRWKVVDHYVSRVCGTMQLLQQNDIIGKTSEL
ARVFGIQFLHVLTRGSQYRVESMMLRVAKPLNYIPVTPSVQQRAQQRAPQCIPLVMEPES
RFYSNSVVVLDFQSLYPSIVIAYNYCFSTCLGHVDSLGTPDEFRFGCTSLRVAPELLYRL
RNDITVSPGGIAFVKASVRKGVLPSMLEEILNTRIMVKRSMKAYKDDKALTRLLHARQLG
LKLIANVTFGYTAANYSGRMPSVEVGDSIVHKARETLERAIRLVNDTKKWGARVVYGDTD
SMFVLLRGATKEQAFRIGSEMAEAVTATNPKPVKLKFEKVYLPCVLQTKKRYVGYMYESL
DQKEPVFDAKGIETVRRDGCPAVSKILERSIKLLFETRDISQVKRFVQRQCLKVLDGRAS
MQDLTFAKEYRGSGSYRPGACVPALELTRRMMAYDRRLEPRVGERVPYVVVYGLPGVPLI
QLVRRPPEVLQDPALRLNATYYISKQILPPLARMFQLVGVDVFSWYQELPRVQKASCSAG
GDQGSRKGTISQYFTTLHCPVCDELTQLGVCCRCRADPQRVVVTLQQDLGGWERQQDTLL
KICRSCSGGAERTVPCVSLDCPVLYKLSRVNRQLSKAPYLRQLLEQF
NT seq
8604 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccgtgcgcctcgtgagcgcggactactacctggcccggcccggcccgctggac
gtgctctggtcggagttccgcggcagcgccgtcagcgccgtgccggtggtgcggatcttc
ggagccacgccggcgggccagaagacatgcctccacctccacggcgtgtttccgtacatc
tacgtgccctacgatggcgccgggcagcagccggagcgctacctgcggcaggtggccttc
agcatcgaccgggccctcaacgtggccatgggaaaccccgcctccagcgcccagcacatc
ttcaaggtggtgctggtgtccggcatgcccttctacggttaccacgcccaggagaagcac
ttcatgaagatctacctgtacaatcctcgcatggtcaaaagggtgtgcgagctgctgcag
agcggagccgtcatgaacaagacctaccagccccacgagggccacatcccctacctgctg
cagctcttcatcgactacaacctgtacggcatgaacctggtccacctgagcgccgtcaag
ttccgcaggagccagagcaaagacggagatcagacagcttccagctgtcgtcccggcaac
agcccctggaaaagcccctgcaccagcaagctgagcagcagcagcgccctggggggctcg
gcggtccgctgggacgagaacgcgttaccctgctcgctggtcctggaggaggtggggagg
cagagcacctgcgagctggaggtggacgccgtggccgtggacgtcctcaaccgcctggat
attgaaaatcagatcggcaggaacccgggcctgcaggccatctgggaggacgagaagcag
aggaggagagaggcggaccggtcctcccagatagaacccccggagtcacaagaccgcggc
tcggtggcctcgacggagagcgagaaggtcttcatgaagagggtgaaggagatcctgaag
gacaacgagttggacacgacacaagatctgtctgtggatgaagacgcagaggagttctct
ggtgacctgacgctgcaccccgaccccccggcccccgacgcgctgccctgcacccccgcc
aacgccgtggagaagcaccgggacgcccagccagactgtgtgaggagcagcgggaaagtc
gcagacgaggccgtggtggacgaggaggccatcctgggcctcctggagagcacccagacc
ttcctccctttctcccagacctccaaccacccccccctgctggacggcagccaggactac
accctggtggatctgctggccggcttagaggacgacggtttccacgggcccccggccccc
cagagctcccagtccggctccaggggctaccactgcaacagcgacgaggaggaggcgtcc
ccagagctggaccaggaggaggcggagctgagtgccgtgatgtcccagcgctgggacgcc
gagcgtcccgggagctccacgctgaggcgcggcctgaaggaggcggaggacggagacacg
gacgaccaccaggagtcctccgacgaggacatggagtggagcgggaactctctgttcgcc
aacctgtccatcccccagctggacggagcggctgacgagagcagcgattcgtccctgacg
gacagcggctccatgtcccagtcgtctctcatggggagcaggaaccccttcgccggggag
acggtccacttggagccgccgtcccccaccaagatcctggtcgagtgccagcaccccgag
ctccgcgcggctcacgcgctggactcggacccgccgcgggacaagctcctggacggcggc
agcgagtgctcggcggggttcaagctgaacaccgagcttccctacatcctgccggtgaag
caccccaccccctgcaaggtggccagtcaccccgaggtgccccccatcggcatggacaag
gaggacatccggcccctgtacccgtacgacaagaagacgtccctgcccctggacgagacg
gagctggagggtttccccttcggccccgggaagaacaggaagcgctacggcggcatgacg
agcgtggagaccaaccgcctgtccatcgtgcagaactgcaggaccttctccctgtgctac
tcggagctgaggaactgctcggccaagacggacatggacctgagccccggcgtcgacgcg
gccccgtcgccgtccagggaggacgagttcctggacccgcggggggaccacatgggccag
aacagcgaggagggggacgtgggggagctcaagatcaggtacgaggactatcaggagaac
aagacggagaggaccatcgtggcccagcaggaggcccactacaagttcttccccagcgtc
atcctgtccaactgcctgggcaggaagaaggccgggggcaagaagccggggggcgacccg
ggcagccgtccggagctgtccccgtcccgcagggccaagctgaaggccgggaggaagagg
ctggggatggccgggccgaggagcagaggcacgcccgggctggacggctccacctcggaa
agcagtccggctccggcagacggggacgagccggagacacgggctcgacccacggaagag
ccaagtgtggaagcagagccggtcctagcagaggaaacggaaccggaccctcagaactct
gcagctgactgctctcttcctgaggagcccagagactcggagggtcagctgaccccggcg
cccgagccgccgcccgctacactcggcggcaccaagccgtcgccggcgctgcccgggagc
aagtacaccctcagggccaagcggaagatgaactacgacggagaggagggggatcccccc
ggatccagctgtcctaaaacgcagggctccgccaaggaccggccgaagggcggcgccgca
cccagcgggccggaaccaaagtaccagaaacgacgcaagaaggagcctcccgtcatcata
aagtacatcatcatcaacaggttcaaggggcagaagaacatgctggtgaagatgagcaag
gtgagcgctgaggagccgctggtgctgctgacacccgagaaactggagcagtactgcaaa
cgggccccgctcaaggacttctggcccatggttccggagtccccggcggccgtgttcccc
gtcagcgagcccaaggccaggaaacaggccaagaggaaggtcaaggtcaaggtcagcagc
gccggtaagaagacgcccgacaaagccgccgccaaacctcggatcaaacgggccaaacga
gtcaaaaaggctggatccggccctagaggcccggttctgggcccggttcggccctccctc
ccgccccccggaccctgttatggtgagctggccgacgaccacgatcgcagctacgccgat
gtcatggtggagctgggctacctgtccgaccggtcctgcagccccgcggagtgcaccccc
ccgcgctgctggtcccccagcgcccccctggctgacacgggtccggagcccctgggggac
ccctccctcagcgacccccgcctcagctctgcctcccacaagccccagaggaggcgtccc
gccaccacccagaggaggaggagcagcaagtctggcgccgggcccccggagcccccggag
cccccaggggagaggcccaggaaacggggcgctgctcccaagcaggcgaagagagctcag
agtccaaaaacgccagcaaagccgaggaggcccggtaagaagaggacgagccagctgaaa
ggtcacgacccgggtcaggaccccccccaggacgggtcggctccgtcgcagggctccccg
tctcagcggccgcctggccaggaccagggcggccagggtgggtcccagactgcccccggg
ccccggtccgtgaggcccaaggtggaggactgcgagacctccatcatggaggtcaaccag
agcctgccggccccggcccagaccaagcagcaggggtgtcagacggccgcggtgaagctg
gaggcgtcgcaggacaagtgctcggccagccctccgtacgcccccccacacccgggccct
cagaacgggcagcccccgcccctcccaggggcctcctccggcctggccgtgctcaagcag
ctgctgcagaagaggcaccagggccgggcgctgcccctgcaggtggtggggggcgatggc
cacgcggcctccacacccgcccagtccaggcgcgccccctccacctccccccggaaaccc
cgggcccccagatccgcagttcccaaggacaagaggccccggagcaggaaggtgaagagg
agcagcacgcagcccacgccctcggtgaagcaggacggccacgcgtcggacgactgcccc
ttcttcctgtcagacccggagctggacagctgcaccttcatcgaggacagcctgtccccg
gagctgccccacagctacaccttcgacatcaacaccatccaccaggccgacttctccagc
ccctacagcggcagccagttcgtgctgacggacaagcacctcccgctcaagttcctgagc
gacgtgagccacgaggccggggagcccccccagaaccagcagagctcctcccagaggggc
cccgagggcgtcggccccgccagcccggacctcttccacaggtcccaggacggggagcag
acgtggggccgggaaccggccggctccgacgggctggagctgccgttcagccagtcccac
gtgtccagcccattccaggacttccactgcgagaggaaggagctgttattctcggcgctg
gacccagtgctgccgctgccgctgagctccgtgtcgctggtggagcacgagggctcgccc
tccagcgagctggacgggctcacgtccaccacgcccagcagctcgccccgctccgtctgc
tcgttgtcgcagggccgggccggccagctgcagcggggcccggcggggggggcccacatc
ctcaagcccctcatgtccccccctagccatgacgagatcctcagcacgctgcaggaccta
gacatgtccgaggccacgttcctggaacccttctgcagcgaccccgccgacgtcccggag
aaacccagggaggtgggcggccgtaagctgacggtggggagcagactggtccaggatctg
gcagagttcagcggagacctgtctctggagggcctgcgcttctggaagacggccttcgcg
gccatgaccaaccccgccggcgtggccccgtcgtccccgggggccggcggggcgccggac
ccgccgctccacccacagctccacccgccctctgccagcaacaggaaggtggtgctgctg
ccctgcaggatcccccccagccagcagcgcgtgcagctctggctggaggcccggaaacag
tacgagagtctccagagaggcaggagggaggttaacctggaggagggagacccgaggagg
gcggagccgccccagcagaacagaaacctctccggcgtcaggacgcccaggaggaagaaa
ctcaacctgtccctgattatttccccgctggccaaacccggctcgccatgcccgtccaca
gaagccagtccggtttcagacctgggcagcgcggctcctgatgaagtcccggagacgccg
tccccagagtccccagagctgcccccgtggcagcccagctcctcggacccaggccggccg
ggcaccaggccggctgagagctcagcagaacctcggccctccggcgtgtctggaccccag
ggggggccgggggggccctgcagcccctgcagcccccgtagcccctcgtctctctgtgac
agtgatggggaggaccaggggctccttcacagcacccccttcctgagcaggcggcgtcgc
tgcaaggaggacccggacccgctgtgcagcacccccatcgctggagatgacccggtagct
gagagactccagcagaggaggaggagccaggccgacccgctgaggagagtgctgctcacc
acgcagatgaagaaccagttcgctgccttgaaagtgccaaagaaagacgactcccagatc
gaagggcccagtatcgccgactcgtacgggtttaaagtcagcatgcagaacctgcaggac
gccaaagctctgcatgaggtccagcacctcacactgatgagcctggagctgcacgccagg
acccgccgtgacctggagccggacccggagttcgaccccatatgtgccttattctactgc
ctgagctcggacgcgctgctgccgggcgacggcggccaggacggcggcgcccggctgacc
ggcgccatcgtggtggaccaggaccacggaggacacggcccaggttgcagcgagacggcg
cccctgctggtcaggtccggcgtctccgggctgcgggtgacgtacgccgccgaggagaag
gtgctgtttgaggagctggtggcggtcgtgaggaggttggacccggacatcctggtgggc
tacgaggtgcagatgcgctcctggggctacctgctgcagcgcggagccgtgctcggggtg
gacctgtgccagcagctgtccagggtgccaggtgactccaaagagaaccgcttctctgca
gagagggacgagtacggagccgacaccatgactgagatcaacatcatcggccgcgtcacc
ctcaacctgtggagggtgatgaagagcgaggtgacgttgaacaactacagctttgagaac
gtggccttccacgtgctccaccagcggttccccctctacgccccgcgcacgctgtccgac
tggttcgaccacaagactcacctacacaggtggaaggtggtggaccactacgtcagccgt
gtgtgtggcaccatgcagctgctgcagcagaacgacataatcggcaaaaccagcgagctg
gcccgggtgtttgggattcagttcctgcatgttctgacccgaggatcgcagtaccgagta
gaatccatgatgctgcgcgtggccaagcccctgaactacatccccgtgacgcccagcgtg
cagcagcgcgcccagcagagggcgccgcagtgcatccccctggtgatggagccggagtcc
cgcttctacagcaactcggtggtggtcctggacttccagtcgctctacccgtccatcgtc
atcgcgtacaactactgcttctccacctgcctgggccacgtggacagtctgggaactcct
gacgagttccggtttggctgcacctcccttcgggtcgctccggagctgctgtaccggctc
cgtaacgacatcaccgtgtctcccggcggcatcgccttcgtcaaggcgtcggtgcggaag
ggcgtcctgcccagcatgctggaggagatcctcaacaccaggatcatggtgaagcgctcc
atgaaagcctacaaggacgacaaggctctgacgaggctgctgcacgcccggcagctgggg
ctcaagctcatcgccaacgtcaccttcggctacaccgccgccaactactccggacgcatg
cccagcgtggaggtgggggacagcatcgtgcacaaagccagggagaccctggagagagcc
atccggctggtcaacgacaccaagaagtggggagcccgcgtggtgtacggagacacggac
agcatgttcgtgctgctgcgaggagccaccaaagagcaggccttccggatcggcagcgag
atggctgaggcggtgaccgccaccaaccccaaaccggtcaagctcaagtttgagaaggtg
tacctgccctgtgtgctgcagacgaagaagcgctacgtgggctacatgtacgagagcctg
gaccaaaaggagcccgtgtttgacgccaaaggcattgagacggtgcgccgtgacggctgc
cccgccgtttccaagatcctggagcgctccatcaagctgctgttcgagacccgggacatc
agccaggtgaagcgcttcgtgcagcgccagtgcctgaaggttctggacggccgggccagc
atgcaggacctgaccttcgccaaggagtaccggggcagcggctcgtaccggcccggggcc
tgtgtgccggcgctggagctcaccaggcggatgatggcgtacgaccggcggctggagccg
cgcgtgggcgagcgggttccctacgtggtggtgtacgggctgcctggcgtgcccctgatc
cagctagtgcgccgccccccggaggtgctgcaggacccggccctgcgcctcaacgccact
tactacatcagcaagcagatcctgccgccgctggcccggatgttccagctggtgggggtg
gacgtgttcagctggtaccaggagctgccccgggtccagaaggcgtcctgctcagcgggg
ggggaccaggggtccaggaaggggaccatctcccagtacttcaccacgctgcactgcccc
gtgtgtgacgagctgacccagctgggcgtgtgctgccgctgccgggccgacccccagagg
gtggtggtgacgctgcagcaggacctggggggctgggagagacagcaggacacgctgctc
aagatctgccggagctgcagcggcggtgctgagcggacggtgccctgtgtctctctggac
tgtcccgtcctctacaagctgtcccgggtcaacaggcagctgtccaaggccccgtacctc
cgccagctgctggagcagttctga
DBGET
integrated database retrieval system
