Cololabis saira (Pacific saury): 133464910
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Entry
133464910 CDS
T09849
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03410
Base excision repair
csai04210
Apoptosis
csai04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
133464910 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
133464910 (parp1)
04217 Necroptosis
133464910 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csai03032
]
133464910 (parp1)
03036 Chromosome and associated proteins [BR:
csai03036
]
133464910 (parp1)
03400 DNA repair and recombination proteins [BR:
csai03400
]
133464910 (parp1)
Enzymes [BR:
csai01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
133464910 (parp1)
DNA replication proteins [BR:
csai03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
133464910 (parp1)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
133464910 (parp1)
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
133464910 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
133464910
NCBI-ProteinID:
XP_061603098
LinkDB
All DBs
Position
18:complement(24860801..24874006)
Genome browser
AA seq
1014 aa
AA seq
DB search
MAESQEDKLYKAEYAKSGRASCKKCKDNIPKDSLRMAIMVQSPMFDGKVPHWHHFSCFWQ
RAAAQSSADIAGFSDLRWEDQEKVKKAIEGGGASGGGKGDQKSAAKGEKTLNDFAVEYAK
SNRSTCKGCEQKIEKDQIRVSKKTVDPEKPQLGLIDRWYHTACFVSRREELVFKPDYSAA
QLKGFNALRAEDKEELKKRLPAVKSEGKRKCDELDGVSKKQKKEEEDEKKKLEEQMKSQS
QLIWGIKDKLRKYCSTNDMKELLIANGQEVPSGESNVVDSLADGMAFGALEACKECKGQL
VFKGDAYYCTGDISAWTKCVFKTPTPARKDWVIPQEFHEVPFLKKFKFKRQDRLFPKEAP
QTPPAVKAEPLASASSAPTERLPEGAPSDKPLTGMKLVAVGKLSKNKDDLKAIVEELGGK
MTGSASKASLCLSTKKEVEKMSKKMEEARDAGVRVVSEDFLTDIKSSGKALQELVSLHAI
SPWGAEVKVEAPAPSVASKSGATPAKSTGRVKEEEGSSKTKKMKLTVKGGAAVDPDSGLE
DSAHVLEQSGKMYSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWGRVGTTIGGNK
LDKSHDKNSALDNFLTVYKEKTGNEWGSSNFTKYPNKFYPLEIDYGQDEEAVKKLTASAG
TKSKLGKPVQELIKMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYALLTEVQQAV
SDSLAEAQILDLSNRFYTLIPHDFGMKKPPLLNNLDYIQAKVQMLDNLLDIEVAYSLLRG
GAQDDDHDPIDINYEKLKTKIHVVDKNTQEAEVITQYVKNTHAATHNTYTLEVQEIFKIS
RDGERQRYRPFEELHNRQLLWHGSRATNYAGILSQGLRIAPPEAPVTGYMFGKGVYFADM
VSKSANYCHTSQSDPVGLLLLAEVALGNMHELKKASHVTKLPKGKHSVKGLGRTAPDPNA
TANLEGVQVPLGKGVNTNIDDTSLLYNEYIVYDVAQINMKYLLKIKFNYQTSLW
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtcgcaggaggacaagctgtacaaggcggaatacgccaaaagtggccgcgct
tcttgcaagaaatgcaaagacaacatccccaaagattctctccggatggccatcatggtg
cagtctcccatgttcgatgggaaagtcccgcactggcaccacttctcctgcttctggcag
cgagcggcagctcaatcctccgctgacatcgccggcttctctgatctccgctgggaagac
caggaaaaagtcaaaaaggccatcgaaggcggcggagcttcaggaggaggaaaaggcgac
cagaagagcgcagctaaaggagaaaagacactgaatgacttcgcagtggaatacgccaag
tccaaccgcagcacatgcaaaggctgtgagcagaaaatagaaaaggatcaaattcgtgtg
tccaaaaaaacggtggacccagagaaaccccagctggggttgatcgaccgctggtaccac
acggcgtgtttcgtgagtcgcagggaggaactggtgttcaaaccggactacagcgctgct
cagctcaaaggattcaacgcactgcgggcggaagacaaggaggagctgaagaagaggctc
cctgctgtaaagtctgaaggaaagcgcaaatgtgacgagttggatggagtgtcaaagaaa
cagaagaaggaagaagaggatgagaagaaaaagcttgaggagcagatgaagagtcaaagc
cagctgatttggggaatcaaggataagctgaggaaatattgttcaaccaacgacatgaag
gagcttctgattgcaaatgggcaggaagttccttcgggagagtccaatgtggtggacagc
ctggctgacggcatggcttttggtgctctggaggcctgcaaggagtgcaagggccagctg
gtgtttaagggagatgcatactactgtacgggggacatttcagcctggacaaagtgtgtg
ttcaaaactccaacacctgcacgtaaagactgggtcatccctcaggaattccatgaagtc
ccatttctaaaaaaattcaagttcaagcggcaggacaggcttttccccaaggaagccccg
caaacgcctccagccgtcaaagccgaacccctggcgagtgcgtcgagcgccccgaccgag
cggctgccagagggagcgccttcagacaaacctctcactggcatgaaactcgtggctgtt
ggaaagctgagcaagaacaaagatgatctgaaggccatcgtggaggagctgggtgggaag
atgactggctccgccagtaaggcctctctgtgcctcagcactaagaaggaggtggagaag
atgagtaaaaaaatggaggaagcccgggacgccggggtgcgtgttgtctctgaggatttc
ctcacagacatcaagtcgtcagggaaagctcttcaggagttggtctctctgcacgctatc
tcaccttggggggcggaggttaaagtggaagctccggctccgtctgtggcctccaagtct
ggagcgacgccggctaagagcaccgggagggtcaaagaggaggaaggtagtagcaaaacc
aagaaaatgaaactcactgtgaaaggtggagctgctgtggacccagactcaggcctggag
gacagtgcccatgtcctggagcagagtgggaagatgtacagcgcgacactgggtctggtg
gatatcgtcagaggaacaaactcctactataaactgcagctgctggaggatgatgtgcag
aaacggtactgggtgttcaggtcctggggcagagtgggaaccaccatcggaggaaacaag
ttggacaaatcccacgacaagaactcggcgctggataatttcctgactgtctacaaggag
aaaactggaaatgaatggggctcttccaacttcaccaaatatcccaataagttttaccca
ctggagatcgactatggacaggacgaggaggccgtgaagaagctgaccgccagcgccggc
accaagtccaagctgggcaaacctgtgcaggaactgatcaagatgatctttgacgtagag
agcatgaagaaggccatggtggagtttgagattgacctccagaagatgcctcttgggaaa
ctgagtaaaagacaaatccagagtgcctacgccctcctcaccgaagtacagcaggctgtt
tcggactccttggccgaggcacagattctggatctctccaaccgcttctacaccctgata
ccccacgacttcggcatgaaaaaacccccactactcaacaacctggattacattcaagcc
aaagtccagatgttggacaacctgttggacattgaagtggcgtacagtttgctgagaggt
ggagcccaggacgatgaccatgatcccatcgacatcaactatgagaaactcaaaactaag
attcacgttgttgacaagaacacacaggaggctgaggtcattacgcaatacgtgaaaaac
acccacgctgctacacacaacacgtacacattggaagtgcaagaaatcttcaaaatctct
cgagatggagagcgccagcggtaccgtcccttcgaggagctacacaatcgacagttattg
tggcacggctcccgagccaccaactacgctggtattttgtctcagggtctccgtattgca
cctccagaggctcctgtgactgggtacatgtttggcaaaggtgtgtattttgctgacatg
gtgtccaagagtgcaaactactgtcacacctcccagtcggaccccgtaggcctcttactg
ctcgcagaggtcgctttaggaaatatgcatgagctgaagaaggcctctcacgttacaaaa
ttacccaaaggaaagcacagtgttaaaggtttgggtaggaccgctcctgatccgaacgct
accgccaatcttgagggagtgcaagtgcctctgggaaaaggagtcaacactaacatcgat
gacacgagtctgctgtacaacgagtacattgtgtacgatgtagctcagataaacatgaaa
tacctcttgaagatcaagtttaactaccagacatctctctggtaa
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