Chryseobacterium salivictor: NBC122_00452
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Entry
NBC122_00452 CDS
T07515
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
csal
Chryseobacterium salivictor
Pathway
csal02020
Two-component system
csal02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
csal00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NBC122_00452 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NBC122_00452 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csal03021
]
NBC122_00452 (rpoN)
Transcription machinery [BR:
csal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NBC122_00452 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Med9
FtsX_ECD
Motif
Other DBs
NCBI-ProteinID:
QBO57301
UniProt:
A0A4P6ZCS1
LinkDB
All DBs
Position
complement(475860..477338)
Genome browser
AA seq
492 aa
AA seq
DB search
MLKQNLQMRLGQKLAPQQIQLMKLIQLHTLEFEEELERELEENPALEKVQEENKEEDYAS
LDEKFEDEGNESIDTDFDVNDYIFDDEPAYKSSANNYSADDEEFDNQSLLTEGESLYDYL
LEQIRLANVDGDDLKIAEYIIGNLDNDGYLRREVKQLVDDLAFSQGLITTTERVTEILEN
YVQKLDPPGVGARGLQECLLLQIEKKVSADKAVILAGNILRNQFDALTNKHYNKIIQKYD
IEEDDLKAALEVISKLSPKVGGNYDTQTITINNEIIPDFLITVKDNGPRGVDVIPSLNSK
NAPSLRVSDEYKDILTTYSHDKKSAEHKQAALFIKQKLDAAKWYIDAINQRQNTLLQTIS
AIVQLQKEYFITADDKSLKPMILKDVADITGFDISTISRVVKSKYADTPNGIVYLKSLFS
DSLTNDDGEEVSTKEIKTHLMEVIENENKRKPHTDDALVGLLKEKGYNIARRTIAKYREQ
LNIPVARLRKEL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaacaaaatcttcaaatgagactcggccagaaattggccccgcaacaaattcag
ttgatgaagttgattcaacttcacacgctggaatttgaagaagaattagagcgcgagctc
gaagagaatcctgctttggaaaaggtgcaggaagaaaataaagaagaggactatgcttcg
ctcgatgagaaatttgaagatgaaggcaatgaaagtatcgacaccgatttcgatgtgaat
gactatattttcgatgacgaaccggcctacaaatcatccgctaataattattctgctgac
gatgaagagtttgataatcaatcccttttaacggaaggtgaatctttgtacgattacctt
ttagagcaaatccgtttggcaaatgtagatggtgatgatttgaaaattgcagaatatatc
atcggaaacctcgataacgacggctatcttcgtagagaagtaaagcagttggtagatgat
ttggccttttcacaaggtttgattacaactacagaaagagtaactgaaattttagaaaat
tacgttcagaaattagatccaccgggagtgggagccagaggtttacaggaatgccttctc
ctgcagattgagaaaaaagtaagtgcagataaagctgtaattttagcggggaatatcctg
agaaatcagtttgatgcattaaccaataagcattacaataagattatccagaaatacgat
attgaagaagacgatctaaaagctgctttggaagtgatttcaaaattgtctccgaaagtg
ggcgggaactatgatacgcagaccattaccattaataatgaaattattccggatttttta
attaccgttaaagataacggaccgcgaggcgtggacgttattccttctttgaacagtaaa
aacgctccgtctttgagggtttcagatgagtacaaagatattttaaccacctattcccac
gataaaaaatcggcggaacataagcaggcagcgctttttattaaacagaaattagatgcc
gcgaaatggtatattgatgcgattaatcagcgccagaatactttactgcaaacgatttct
gccatcgttcagttacagaaagaatatttcattactgcggatgataagtcactgaaaccg
atgattctgaaagatgtggcagatattacaggtttcgatatttctacaatttcccgtgtg
gtaaaaagcaaatacgccgatacaccgaatggaatcgtttatttaaaaagtctcttttca
gattcgttgacgaatgatgacggtgaagaagtttctaccaaagaaatcaaaacccatctg
atggaagtgatcgaaaatgagaacaaaagaaaacctcatacagatgatgcactggttggc
cttttgaaagaaaaaggatataatatcgccagacgtacgattgcaaaataccgtgagcag
ctgaatattccggtagcgcggttgagaaaagaactgtaa
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