Chryseobacterium salivictor: NBC122_01058
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Entry
NBC122_01058 CDS
T07515
Name
(GenBank) hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
csal
Chryseobacterium salivictor
Brite
KEGG Orthology (KO) [BR:
csal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csal03400
]
NBC122_01058
DNA repair and recombination proteins [BR:
csal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
NBC122_01058
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
TrwB_AAD_bind
AAA_22
AAA_16
AAA
ResIII
FtsK_SpoIIIE
AAA_10
AAA_7
Zot
AAA_30
AAA_6
BD-FAE
Motif
Other DBs
NCBI-ProteinID:
QBO57887
UniProt:
A0A4P6ZEE9
LinkDB
All DBs
Position
complement(1129166..1130692)
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AA seq
508 aa
AA seq
DB search
MADKAKFVQELSSRYAPKGEFITLGKAMLDGEVVSEVDITIPLKTINRHGLIAGATGTGK
TKTVQVFAEQLSHAGIPSLVLDIKGDFSGIAEPGTENAIINERYAKTKLPYQPQAFPVEL
MSISGEKGIKLRATVTEFGPLLLSKILNLNDTQQSIISIVFKYCDDKGLPLVDLDDLKKV
LQYVTDNAQGKADLSNNYGSISTASLGAILRSIVALEQQGATSFFGEPSFDVEDLLQKRD
GKGVVNILRVANIQSKPQLFSTFMLSLFAEIYMMFPEEGDSGKPKLVLFIDEAHLIFNEA
SKVLLSQIETMVKLIRSKGVGIYFITQIPGDVPENVLSQLGLKIQHALRGFTAKDKKEIS
KAVENYPTTEYYNAKDLIQNLGIGEAFITALDEKGIPTPLVQTFLISPESRMDILSDAEV
ADLTGKSAMVAKYEQTVNKDSAYEMLTSRMEQAVQQAEPTLKTRPVKQEPGMFESVMKSP
AGRTFATTLAREGAKFVLGMFGLGGRKK
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaagcaaaattcgttcaggaactttcttcaagatacgccccaaaaggcgaa
ttcatcactttaggaaaagccatgctcgacggcgaagtagtgagcgaagtggatataacc
attccattaaaaacgatcaaccgccacggattaatcgcgggtgccacaggaaccggaaaa
acaaaaacagttcaggtttttgcagaacaactttcccacgccggaatcccctctttggtt
ctggatattaaaggtgatttctctggtatcgcagaaccgggaaccgaaaacgccattatt
aatgaaagatacgccaagacaaaacttccttatcaaccacaggcttttcctgtagaactc
atgtcgatttcgggagaaaaaggaattaaactaagagcaaccgttaccgaattcggcccg
cttttattatcgaaaatccttaatcttaatgatacgcaacaaagcattatttcgatcgtt
ttcaaatattgtgacgacaaaggcttaccgcttgtcgatttagatgatttgaaaaaagtc
ttacaatatgtgaccgataatgcgcagggaaaggctgatttgagcaataactacggttcg
atttctaccgcttctctgggcgcgattcttcgttcaatcgtggcattggaacagcaaggc
gccacctcatttttcggagaaccaagttttgatgtagaagacctgcttcaaaaaagagat
ggaaaaggcgttgtgaacattttgagagtcgccaatatccaaagcaaaccacaacttttt
tctaccttcatgctttctttgtttgctgaaatttatatgatgtttccggaagaaggagat
tccggcaaaccgaaactggtgcttttcatcgatgaagcccatttgattttcaatgaagcc
tcgaaagttttattaagtcaaattgaaaccatggtaaaactgattcgttccaaaggagtc
ggaatttatttcatcacgcagattcctggagatgtccccgaaaatgttttatctcagtta
ggcttaaaaatacagcacgcccttcgcggatttaccgccaaagacaaaaaagaaatttcg
aaagcggttgaaaattatccgaccacagaatattacaatgcgaaagacctgattcaaaac
ctgggaattggcgaagcattcattacggcattggatgaaaagggaatcccgacaccgtta
gttcaaactttcttaatttcaccagaatcaagaatggatatcctaagtgacgcagaagtt
gcggatttaacaggcaaatcggcaatggttgcgaaatacgaacagaccgtcaataaagat
tctgcctacgaaatgctgaccagcagaatggaacaggcagttcagcaagcagaaccaaca
ttgaaaacgcgccctgtaaaacaggagcccggcatgtttgaaagtgtaatgaaatctcct
gcagggagaacatttgccacgactttggctagagaaggcgcaaaatttgttttgggaatg
tttggtttaggcggaagaaagaaataa
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