Chryseobacterium salivictor: NBC122_01225
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Entry
NBC122_01225 CDS
T07515
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
csal
Chryseobacterium salivictor
Pathway
csal03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NBC122_01225 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csal03021
]
NBC122_01225 (rpoA)
03400 DNA repair and recombination proteins [BR:
csal03400
]
NBC122_01225 (rpoA)
Enzymes [BR:
csal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NBC122_01225 (rpoA)
Transcription machinery [BR:
csal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NBC122_01225 (rpoA)
DNA repair and recombination proteins [BR:
csal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NBC122_01225 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QBO58052
UniProt:
A0A4P6ZF37
LinkDB
All DBs
Position
1290982..1291977
Genome browser
AA seq
331 aa
AA seq
DB search
MAILTFIKPDKVILLNSNEFKGQFEFRPLEQGFGLTIGNALRRVLLSSLEGYAISSIKIE
GVEHEFSTIPGVIEDVTEIILNLKQLRLRAKSETATAEEVTAKVSGQTTVTAGDLGKSMQ
DFEVLNPDLVICSTNKDVKFEITFNIEKGRGYVPSEQNKSNNAPIGTIAIDSIYTPIKKV
QYSVENYRVEQKTDYEKLVLDIETDGSISPQNALTEASKILIYHFMLFSDERITLETEAV
KASIQYDEETLHTRQLLKSKLVDMDLSVRALNCLKAAEVETLGELVSYTKSDLMKFRNFG
KKSLTELEELVHAKGLNFGFDVAKYKLDADK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttaacatttattaaacccgataaagtaatcctccttaactccaatgaattc
aaaggccaatttgaattcagaccattagagcaagggtttggacttaccatcggtaatgct
ttgagaagagttttactttcttctcttgaaggatatgctatttcatctatcaaaatagaa
ggcgtagagcacgaattttcaacaattccaggtgtaattgaagacgttacagaaattatt
ctgaacctgaaacaattaagactgagagcaaaatctgagactgcaactgcagaagaagtg
actgccaaagtatctgggcaaactactgtaacagctggcgacttaggaaaatcaatgcaa
gattttgaagtattgaatcctgacttagttatctgttcaacaaacaaagacgtgaaattt
gaaatcacgttcaatattgagaaaggtagaggttatgttccttccgaacaaaacaaatca
aacaatgctcctatcggaactattgctattgattccatctatactccgatcaaaaaagta
cagtacagtgttgaaaactatcgtgtcgagcaaaaaacagactacgaaaaactcgttttg
gatattgaaactgatggttctatcagtcctcaaaatgctttaactgaagcttctaagata
ttaatttatcatttcatgctgttctccgatgagagaattacgctggaaactgaagcggta
aaagcgtcgatccaatacgatgaagaaaccttacataccagacaactactgaaatcgaaa
ttagtagatatggatttgtcggtaagagcattaaactgcttgaaagctgctgaagtggaa
actttaggagaactggtttcttacaccaagtctgatttgatgaaattcagaaatttcggt
aaaaaatctttaacagaattagaagaattagtgcatgcaaaaggtctaaacttcggtttc
gacgttgctaaatataaattagacgctgataaataa
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