Chryseobacterium salivictor: NBC122_01247
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Entry
NBC122_01247 CDS
T07515
Symbol
rlmCD
Name
(GenBank) 23S rRNA (uracil-C(5))-methyltransferase RlmCD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
csal
Chryseobacterium salivictor
Brite
KEGG Orthology (KO) [BR:
csal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csal03009
]
NBC122_01247 (rlmCD)
Enzymes [BR:
csal01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
NBC122_01247 (rlmCD)
Ribosome biogenesis [BR:
csal03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NBC122_01247 (rlmCD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
MTS
Methyltransf_11
Methyltransf_15
TRM5-TYW2_MTfase
RrnaAD
Cons_hypoth95
N6_N4_Mtase
PCMT
Methyltransf_4
FtsJ
Methyltransf_2
PrmA
NpmA
Motif
Other DBs
NCBI-ProteinID:
QBO58074
UniProt:
A0A4V1AL04
LinkDB
All DBs
Position
1316371..1317780
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AA seq
469 aa
AA seq
DB search
MRKRNKNIVLENIKLVSAGSKGVAVGKTAEGKTVLVSGAVPGDIVNARVKKSKSNYFEAE
MIEIVERSPFRVEPKCIHFGVCGGCKWQNLSYEKQLEFKQDEVFNHIKRIGGIEDFETLP
ILGSDEQYFYRNKMEFSFSNARWLTQYEISSEENFGNRDALGFHIPGMWSKILDLKECFL
QEDPSNAMRLAIKKHAVENGLEFFDVKGQQGFLRTVMFRQNSKGEWMVLFQLFREEKENQ
QQLFDFMLGEFPQIKTLLFCINSKQNDSLYDQDVQTYFGDGFLMEEMEGLKFKIGPKSFF
QTNYKQALNLYAKTLEFADLKGDEVVYDLYTGTGTIAQYVAKKAKQVIGIESVQESIDAA
KEHAELNGLTNCTFYCGDMKEIFNDEFIAQHPKADVLITDPPRDGMHQKVVEQILKIAPE
KIVYVSCNSATQARDLALMKDHYKLVKILPVDMFPQTHHVENIALLIKI
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagagaaataaaaatattgttttagagaatatcaaattggtttctgccggttca
aaaggcgttgctgtaggaaaaaccgctgaaggaaaaaccgttttggtttcaggtgcggtt
cccggagatattgtaaatgcccgcgtaaaaaaatcaaaatccaattacttcgaagcagaa
atgattgagattgtcgaaagatcacctttccgtgtggaaccgaaatgtattcacttcggg
gtttgtggcggttgcaaatggcagaatctttcttatgaaaaacaactggaatttaaacag
gacgaagtttttaatcatattaaaagaatcggaggaattgaagattttgaaactttgcca
attctcgggagcgatgaacagtatttctatcgtaataaaatggaattttctttttccaat
gcacgttggctcacccaatatgaaatcagttctgaagagaatttcggaaatcgcgatgct
ttaggatttcatattccaggaatgtggagcaagattttggatttgaaagaatgtttcctt
caggaagacccatcgaatgccatgcggctggcgattaaaaagcatgcggtagaaaatggt
ttagagttttttgatgtcaaaggtcagcagggttttttgagaaccgtcatgttccgtcag
aattcaaaaggcgagtggatggttttatttcagttattccgggaagaaaaagaaaatcag
cagcaattattcgactttatgttgggcgaatttccacagattaaaactttacttttctgt
atcaattcaaaacaaaatgactctttatacgatcaggacgttcaaacttattttggcgat
ggttttttaatggaagaaatggaaggcttgaaatttaaaatcggacccaaatctttcttc
cagacgaattataaacaagccttaaatttatatgcaaaaactttggaatttgctgattta
aaaggtgatgaggtcgtttacgatttgtacacaggaactggaacaattgctcagtatgtt
gcgaaaaaagcaaaacaggtcatcggaattgagtcggttcaggaatcgattgatgccgca
aaagaacacgcagaactgaacggtttaaccaactgcaccttctattgtggtgatatgaaa
gaaatctttaatgatgaatttatcgcacaacatcccaaggcagatgtactgattaccgat
ccgccaagagacgggatgcaccagaaagtagtagagcaaattctgaaaatcgcaccggaa
aaaatcgtttacgtaagttgtaattctgccacacaggcgagagatttagctttgatgaaa
gaccattacaagctggtgaaaattttaccggtagatatgttcccacaaacgcatcatgtt
gaaaatattgctttactaattaaaatataa
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