Chryseobacterium salivictor: NBC122_02041
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Entry
NBC122_02041 CDS
T07515
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csal
Chryseobacterium salivictor
Pathway
csal03420
Nucleotide excision repair
csal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NBC122_02041 (pcrA)
03430 Mismatch repair
NBC122_02041 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csal03400
]
NBC122_02041 (pcrA)
Enzymes [BR:
csal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NBC122_02041 (pcrA)
DNA repair and recombination proteins [BR:
csal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NBC122_02041 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NBC122_02041 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
QBO58849
UniProt:
A0A4P6ZGW6
LinkDB
All DBs
Position
2194759..2197092
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AA seq
777 aa
AA seq
DB search
MKMEYLKGLNEAQYEAVTTLEGPLMVLAGAGSGKTRVLTMRIAHLITNLVDPFNILSLTF
TNKAAKEMKERIAKVVGQSEAKSLWMGTFHSVFARILRSEAHYIGYPSNFTIYDSQDSLN
VIRKVLKDLKIDSDLYKPKKVQARISSYKNNLITVKAYLNNPELIEADEKANMKSIGVIY
QKYVEACFKNGAMDFDDLLLRTNELLTRFPEVLAKYQDRFRYILVDEYQDTNHSQYLIVK
ALASKFENICVVGDDAQSIYSFRGANIYNILNFKKDYPDAVTVSLEQNYRSTQNIVNAAN
VVISKNLQQFKKNVFSDNEEGEKIKVYRSLSDADEANFVASNIWQQHNSEQKKFTDFAIL
YRTNSQTRAFEDALRRKNIPYKVFGGLSFYQRKEVKDLVAYLRILINENDSEALSRIINY
PVRGIGETTQNKLIVFADSQNISVSQVLDNLGFYAPNLKLNNGILTKLSDFWSMIKAFQV
MLKTENAYNVAMEVAKRTGLIKFLKDDQTPEGISRVENIQELMNSMQGFIEEQQQIEDGD
PSLSSFLENIALSADTQTDKNEEGDQVSLMTIHLSKGLEFPVVHVVGLEENLFPSFMSSS
TREELEEERRLFYVALTRAEKEVFFTYAVSRFQWGKITSAEPSRFLSEVDEQYLEFVNPA
TESRFMNNSGLKSNIFDDEPAEPRFFKKKEPKKTIERNEPLPVPQNLKPVATARIINPSG
NSSQDIEVGDRVRHDRFGVGEVIFLDGTDAQNIKAKVKFQHEGEKNLILKFAKLTKI
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggagtatttaaaaggactgaatgaagcgcaatatgaagccgtaactaccctg
gaaggaccgttgatggttctcgccggagccggatccggtaaaacgcgcgtgcttacgatg
cgtatcgctcatttgattaccaatctggtggatccttttaatattttgtccttaactttt
accaataaagcggcaaaagaaatgaaggaaaggatcgcaaaagtagtcggtcaaagtgaa
gcgaaatccctttggatggggacttttcactccgtctttgcgcggattttgaggtcagaa
gcccattatattggttatccatcaaactttaccatctatgattctcaggattctttgaat
gtcattcgaaaagtgttgaaagaccttaaaatcgattccgatttatacaaacctaaaaaa
gttcaggcgagaatttcttcttataaaaataatctgatcaccgtaaaagcctatctcaat
aacccggagcttattgaagccgacgaaaaagccaatatgaaaagtatcggcgtgatttat
cagaaatatgtcgaggcttgtttcaaaaacggggcgatggatttcgatgatttactctta
agaaccaatgaattgttaacgagatttccagaagttttagcgaaatatcaggaccggttc
cgttacattttggttgatgagtaccaggataccaaccattcacagtatttaattgtgaaa
gctttagcttctaaatttgaaaatatttgcgtcgtaggagacgatgcacagtccatttat
tctttccgtggggcgaatatttacaacatcttaaactttaaaaaagattatccggatgcg
gtgaccgtttcgctggaacagaattaccgctccacccaaaatatcgtcaatgccgcaaat
gtggtgatttctaaaaacctgcagcagtttaagaaaaacgtatttagtgataatgaagag
ggtgaaaaaattaaagtgtaccgttcactttcagatgcggatgaagccaattttgttgct
tctaatatttggcaacagcataattctgaacagaaaaaatttactgattttgcgatttta
taccgcaccaattctcagacgcgggccttcgaagatgcgttgagaagaaagaatattccg
tataaggttttcggcggattgtccttttaccagagaaaagaagtgaaagatttagtagcg
tatctacggattttaattaatgaaaatgattccgaagcgctttccagaattatcaattat
ccggtccgtggaattggagaaactacgcaaaacaaattaatcgtctttgctgattctcaa
aatatttcggtctcgcaggttttggataatctggggttttatgcgcctaacttgaaatta
aataatggaattttaacaaagctttctgatttttggtcgatgattaaagcatttcaggtc
atgttgaaaaccgaaaacgcatacaacgtcgctatggaagttgcgaaaagaacgggcctt
atcaagtttttaaaagacgatcaaactcccgagggaatttcccgggtagaaaatattcag
gaactgatgaactcgatgcagggttttatcgaagagcagcaacagatagaagatggtgat
ccgtcgctttccagtttcctcgaaaatatcgctctttcagcagatacgcaaaccgacaaa
aatgaagagggcgaccaggtttcactaatgacgattcacctttcaaaaggtttggagttt
ccggtggttcacgtggttggattagaagaaaatctcttcccgagttttatgagttcatcc
accagagaggagttggaggaagaaagacggttattttatgtcgcattaaccagagctgaa
aaggaagtgttttttacctacgcggtttcccgttttcaatgggggaaaattacgagtgca
gaaccttctagatttttaagtgaagttgatgagcagtatctggaattcgttaatcctgcg
accgaaagccgtttcatgaataattccggtttaaaatcgaatatttttgatgatgaacct
gcagagccgagattctttaaaaagaaagaaccgaagaaaacaattgaaagaaatgagccg
ctgccggtgccgcaaaatttaaaacctgttgcgacggcaagaatcatcaacccaagtggg
aattcttcccaggatatcgaagtgggcgacagggttcgtcacgaccgttttggtgtagga
gaagtgattttcctggatggaactgatgctcaaaatatcaaagcaaaagtgaaattccag
catgaaggcgaaaaaaatctcattttgaaattcgcgaagctgacgaaaatttaa
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