Chryseobacterium salivictor: NBC122_02364
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Entry
NBC122_02364 CDS
T07515
Symbol
sbcC
Name
(GenBank) Nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
csal
Chryseobacterium salivictor
Brite
KEGG Orthology (KO) [BR:
csal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csal03400
]
NBC122_02364 (sbcC)
DNA repair and recombination proteins [BR:
csal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NBC122_02364 (sbcC)
Archaeal homologous recombinant proteins
NBC122_02364 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_21
AAA_29
TMF_TATA_bd
Noelin-1
ABC_tran
DUF2721
Motif
Other DBs
NCBI-ProteinID:
QBO59168
UniProt:
A0A4P6ZHW5
LinkDB
All DBs
Position
2545930..2548962
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AA seq
1010 aa
AA seq
DB search
MIPVQLTLEGLYSYQERQTIDFKNLTESGLFGIFGAVGSGKSSILEAISFALYGETERLN
ARDKRAYNMMNLKSNRSFIEFDFFNFENKKFRATREFKRNSKNFDDVKPSNVVFYEWKEN
RWEPLEHVNPEKIINLTYANFKRTIIIPQGQFKEFLELGATDRTNMMKEIFNLYRFDLQN
NVSGLNAKNRSELDQLEGQLKGFEEINEEQIAAQKENLTLLQKKFEEAKNEFNKIDKKYQ
IQKNLKTDFELLNEKQENFKKLSLEKTEIDGLEKQTERFEQVFRLFNPLIGEKNKLQKEI
DSKNHEKEIQGKNLAETERKFNVLKESITAILPQYEVLERSKIKENDLRLILQMLRFSAE
IEILKSRTENGVKEVEKVSENQKTIRNKIDVLLKNSELLKSQRLDAQLLLNVGNWFSKKR
NLTESLQAQLKKTDDLNSEIHNISEELKTFTIDAETFKNDFKLKNDSLENQKKSLSEKKN
QLEVQQQLAHFANELHDGESCPLCGALEHPDIVEFEDVKSELSAVAEQIIAIENQQKELQ
QTSSEIEKILAKKKFFESQLKAENEAFDQIKTEVDTHQNIFCWKEFNAENEPDFELKRKQ
TFDLEKQIEALSQEISQQQKNLEKERESLDKFNKALEDFKLKDKEVETKFKTSQSNLKNL
FWEEFSKKSVEEVEERFQNLSKSNLKTEHEYQNLIQQEKELSPKFAEQKAVSEQLGKRIA
ELEKEISENGTVLIQHLEDHQFSNLEEVETILAQEINVQNNRNQIQKFRIDFETLKNGVE
ELSLKLKGFSFDESQFAALETQFKTGENELKTANDNVVKLCSEIDRLEKEFKKKEDLLKE
LAKLQKRADHLKIMTNLFKGAGFVQYVSSIYLRQLCDHANIRFHRMTRNQLSLQLNENND
FEIVDFLNEGRSRSVKTLSGGQSFQVSLSLALALAESVQANAQAEKNFFFIDEGFGTQDL
ESVNVVFETLTNLQKENRIVGIISHVEELKEKMPVSLNIIKDEERGSLIF
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgattccggttcaactcacgctcgaaggtttatattcttatcaggaaagacagactatt
gattttaaaaatcttacagaatccggtcttttcggtattttcggagcggtcggttccgga
aaatcatccattttggaagcgatttcgtttgctttatacggcgaaacagaacggctgaat
gcaagagacaaacgggcctacaatatgatgaatctgaaatcaaaccggtcttttatcgaa
tttgatttctttaattttgaaaataagaaatttcgcgcgaccagagaatttaaacggaat
tctaaaaactttgacgatgtgaaaccatcgaatgttgttttttatgaatggaaagaaaac
cggtgggaacctttggaacatgtaaatccagaaaagataatcaatcttacgtatgcgaat
ttcaaacgcacgattattattccgcaaggccagttcaaagagtttctggaactgggtgca
actgacagaaccaatatgatgaaagagattttcaatctgtatcggttcgatctgcagaat
aatgtttcaggtttgaatgcgaaaaacagatctgaactggatcagttagaaggtcagctg
aaaggttttgaagaaataaatgaagaacagattgctgctcagaaagaaaatttaaccttg
cttcagaaaaagtttgaggaggcaaaaaatgaatttaataaaattgataagaaatatcag
attcaaaagaatcttaaaacagattttgaactgttaaatgagaagcaggaaaacttcaaa
aaactttcgcttgaaaaaactgaaattgacggattagagaagcagacagaacggtttgag
caggttttcagattattcaatcctttgattggcgagaaaaataaacttcaaaaagaaatt
gattctaaaaatcacgagaaagaaattcagggtaaaaatttagcagaaactgaacggaaa
tttaatgtgttgaaagaaagcattacagcaattttgcctcaatatgaagttctggaacgg
tctaaaattaaggaaaatgatctgcgtttgatcctgcaaatgctcaggttttcagccgaa
atcgaaattctcaaatcccgaactgaaaatggcgtaaaagaagtagaaaaggtttctgaa
aatcaaaaaacaatcaggaataaaattgatgttttgctgaaaaattcagagcttttgaaa
tcgcaaagattagatgctcaattattattaaatgtcggaaactggttttcaaaaaagaga
aatttaacggaatctcttcaggcccaacttaagaaaacagatgatttaaattcagaaatt
cataacatttctgaggaattgaaaacttttactattgatgctgaaacttttaaaaatgat
tttaaactgaagaatgattctttagaaaatcagaaaaaaagtctttcagaaaaaaagaat
caactggaagttcagcagcaactggcgcattttgccaatgaactgcacgacggagaatcc
tgtccgctttgtggcgctttggagcatccggatattgttgaatttgaagatgtgaaaagt
gaactttctgcagttgctgagcaaattattgcgattgaaaaccagcagaaagaactgcaa
cagacaagttcggaaattgaaaaaattctggcgaaaaagaaattctttgaaagccagtta
aaagcagaaaacgaagcttttgatcagataaaaacggaagttgatacccatcaaaatatt
ttttgttggaaggaatttaatgctgaaaatgaacctgattttgaactgaaacgaaaacag
acttttgacctcgaaaaacaaattgaagcgctaagtcaggagatttctcagcagcagaaa
aatctggagaaagagcgtgaaagcctggataaattcaataaagccttagaagatttcaaa
ttaaaggacaaggaagttgagacgaaattcaaaaccagtcagtcgaatttgaagaattta
ttttgggaagaattcagcaagaaatctgtggaggaggtggaagagcgttttcagaatctc
tcaaaatcaaatctgaaaaccgaacacgaataccaaaatttaattcaacaggaaaaagaa
ctttcgccaaagtttgctgagcagaaagcggtttccgaacaattgggaaaacgaattgcg
gaattggaaaaagaaatctcagaaaatgggactgttttaattcaacatttagaagatcat
caatttagtaatttagaagaagttgaaaccattttagcgcaggaaatcaatgttcaaaat
aatagaaatcagatccagaaatttagaattgattttgaaactctgaaaaatggagtggaa
gaattatcactaaaattaaaaggtttttcttttgacgaatcgcagtttgctgctttggaa
actcaatttaaaacgggtgaaaatgaattgaaaaccgcaaatgataatgtggtaaaacta
tgttcggaaatcgacagacttgaaaaagaatttaagaaaaaagaagatcttttaaaagaa
ttagcgaaacttcaaaagcgtgcagatcatctgaaaataatgacgaatctctttaaagga
gcgggttttgtgcaatatgtttcttccatttatttaagacaattgtgcgatcatgcgaat
attcgttttcaccggatgacccgaaatcaactgagtcttcaactgaatgaaaataatgat
tttgaaatcgtggattttctgaatgaaggcagaagccgaagtgtaaaaaccttgtctggc
ggacaatcttttcaggtttctctaagtctggctttggctttggcagaaagtgttcaggcg
aatgcgcaggcggaaaagaatttcttctttatcgatgaaggtttcggaactcaggatctg
gaatcggtgaatgttgtttttgaaaccctgaccaatttgcaaaaagaaaacagaattgtc
ggcattatttcccacgttgaagaactgaaagaaaaaatgccggtttcgctgaatatcatc
aaagatgaagaaagaggaagtttgattttttaa
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