Chryseobacterium salivictor: NBC122_02427
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Entry
NBC122_02427 CDS
T07515
Symbol
degU
Name
(GenBank) Transcriptional regulatory protein DegU
KO
K07692
two-component system, NarL family, response regulator DegU
Organism
csal
Chryseobacterium salivictor
Pathway
csal02020
Two-component system
csal02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
csal00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NBC122_02427 (degU)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NBC122_02427 (degU)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
csal02022
]
NBC122_02427 (degU)
Two-component system [BR:
csal02022
]
NarL family
DegS-DegU (multicellular behavior control)
NBC122_02427 (degU)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
HTH_23
Sigma70_r4_2
HTH_29
HTH_Tnp_ISL3
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
QBO59231
UniProt:
A0A4P6ZHL6
LinkDB
All DBs
Position
complement(2621222..2621866)
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AA seq
214 aa
AA seq
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MERIKIAIVDDHKLVSKAIENMISFNPKFEVVMNCFNGEDFLKQLDHRKTLPEVVLMDIN
MPRKNGIETTLELTKNYPDLKVIALTMEDNESTIISMLKAGAKGYLLKDMSPDILFDAIN
IVHEKGIFYTDIVTQSLLKIKTEEKINQEINSSLKDREVEFIKLACSELTYKEIAEQMCV
SPRTVDGYRDSIFAKLNVKTRVGIVLFAIKHHMC
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaataaaaatagcaatcgtagatgaccacaaattagtttccaaggccattgaa
aacatgatttcatttaatccaaaatttgaagtggtaatgaattgctttaatggcgaagat
tttctgaaacagctcgaccaccggaaaacacttcctgaagtagtcttaatggacatcaat
atgccccggaaaaacggtatcgaaacaaccctcgaacttactaaaaattatcccgaccta
aaggtgattgctttaacgatggaagataatgaaagcactattataagcatgttgaaagca
ggagcaaaagggtatttgctcaaagatatgtcgcctgatattctttttgatgctataaac
atcgttcatgaaaaaggaattttctataccgatatcgtaacccaaagtcttctgaaaata
aaaaccgaagaaaagataaatcaagaaataaacagttcgttaaaggaccgcgaggtagaa
tttattaaattggcctgctctgaactcacctataaggaaattgcagagcaaatgtgtgtg
agcccaagaactgtagacggatacagagactcaatcttcgcaaaactgaacgtaaaaacc
agagtaggaattgtgctttttgccatcaaacatcatatgtgttaa
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