Corynebacterium sanguinis: E3227_02500
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Entry
E3227_02500 CDS
T06569
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
csan
Corynebacterium sanguinis
Pathway
csan03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E3227_02500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csan03021
]
E3227_02500
03400 DNA repair and recombination proteins [BR:
csan03400
]
E3227_02500
Enzymes [BR:
csan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E3227_02500
Transcription machinery [BR:
csan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E3227_02500
DNA repair and recombination proteins [BR:
csan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E3227_02500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QDR77050
LinkDB
All DBs
Position
complement(503662..507660)
Genome browser
AA seq
1332 aa
AA seq
DB search
MFDVNLFDELRIGLATADDIRRWSHGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDDEARHNDLSTLEAEMILEKKEVEADANSEIAERAQKLEED
LAELEAAGANASSRKKVQQAADKEMTHIRQAAEREVERLDEVWQTFVKLAPKQMVIDENL
YEELMDRYEDYFTGGMGAEAIQTLIRNFDLEAEAEELRSVIAEGKGQKKVRALKRLKVVA
AFLRSGNDPAGMILDAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVDNDYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVLLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLSSNNILSPASGKPLAMPRLDMVTGLYFLTMLKGGTEIGGE
GAYAPADENGPERGVYTSYREAIMAYDRGVLGMQAPIKVRIDHLRPTEEIEAEFFPDGWE
KGQSWMADTTLGRILFNEMLPFNFPYQEGAMVRKGGGSGKVLLGDVIQSMVEKYPMITVA
QTLDKMKDAGFYWATRSGVTISMSDVLVLPNKVEVLEQYEREAEEIERKFWEKGALTEEN
RYDRLVELWQDATNKVGQAVEDLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSRG
EYITRPIKTSFREGLSVMEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVRED
DCGTHQGVKVPVAQLAGDKWARNDLVETSVSGRVSASDAKDADGNVVLEAGSDLTEENID
RLVAAGVAEVKVRSVLTCQTPTGVCAKCYGKSMATGKLVDIGEAVGIVAAQSIGEPGTQL
TMRTFHQGGVGGDITGGLPRVQELFEARVPKNRAPIASVAGTVTLEDEGNFWTLTIHPDD
GSDVVVYEKLSKRQGLAQVRRPMESNPNAMIERSLREGDHVEVGDRLLRGAADPHDVLEV
LGRRGVEKHLIDEVQAVYRTQGVSIHDKHIEIIIRQMLRRGNVIDSGDTEFLPGTLVDLA
EARQVNAATVADGGQPAEMRSEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSDK
LIGLKENVIIGKLIPAGTGIARYRNIQVKPTEAARSAAYAIPSFGDSIYGDDGYGEFTGA
SVPLDEYGFDQV
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgacgtaaacctcttcgacgagcttcgcattggcctggccaccgccgacgatatc
cgccgttggtcccacggcgaggtcaagaagccggaaaccattaactaccgcaccctcaag
ccggagaaggacggtctcttctgcgagcgcatcttcggccccacccgcgactgggagtgc
gcctgcggcaagtacaagcgcgtgcgctacaagggcatcatctgtgagcgctgtggcgtc
gaggtgaccaagtccaaggtgcgccgcgagcgcatgggccacatcgagctcgccgctccc
gtgacccacatctggtacttcaagggcgtcccctcgcgcttgggttacctccttgatctt
gccccgaaagaccttgagcgaatcatctacttcgccgccaacatcatcacctccgtcgac
gacgaggcacgtcacaacgacctctcgacgctcgaggctgagatgatcctggagaagaag
gaagttgaggcggacgcgaactccgagatcgcggagcgcgctcagaagctcgaggaagac
ctcgcggagctggaggcggccggcgcgaacgcgtcgtcacgcaagaaggtgcagcaggcg
gccgacaaggagatgacccacatccgccaggcggcggagcgtgaggtcgagcgtctcgac
gaggtgtggcagacctttgtcaagctcgcgccgaagcagatggtcatcgacgagaacctc
tacgaggaactcatggaccgctacgaggactacttcacgggcggaatgggcgccgaggcg
atccagaccctgatccgcaacttcgacctcgaggccgaggccgaagagctgcgcagcgtc
atcgccgagggcaagggccagaagaaggtccgtgcgctcaagcgcctcaaggttgttgcc
gcgttcctgcgctccggcaacgacccggccggcatgatcctggacgcgatcccggtcatc
ccgccggagcttcgcccgatggttcagctcgatggcggccgctttgcgacgtccgacctc
aacgacctgtaccgtcgcgtgatcaaccgcaacaaccgcctcaagcgcatgatcgacctc
ggcgcgcccgagatcatcgtgaacaacgagaagcgcatgctgcaggaatccgtcgacgcg
ctgttcgacaacggccgccgcggccgccctgtgaccggcccgggcaaccgcccgctgaag
tccctgtcggacctgctcaagggcaagcaaggccgcttccgccagaacctgctgggcaag
cgtgtggactactccggccgttcggtgattatcgtcggcccgcagctcaagctgcacgag
tgcggtctgccgaagctgatggctctcgagctgttcaagccgttcgtgatgaagcgcctg
gtggacaacgactacgcgcagaacatcaagtcggccaagcgcatggtggagcgccagcgc
cccgaggtgtgggacgtgctcgaagaggccatctccgagcaccccgtgctgctcaaccgc
gccccgacgctgcaccgcctgggcatccaggcgttcgagccgaagctcgtcgagggtaag
gctatccagctgcacccgctcgcgtgtgaggcgttcaacgctgacttcgacggcgaccag
atggctgttcacctaccgctgtccgctgaggcgcaggctgaggcccgcgtgctcatgctg
tcgtcgaacaacatcctgtccccggcgtccggcaagccgctggcgatgccgcgcctggac
atggtgaccggtctgtacttcctgaccatgctcaagggcgggaccgagatcggcggcgag
ggcgcttacgccccggccgacgagaacggcccggagcgcggtgtctacacctcctaccgc
gaggccatcatggcctacgaccgcggcgtgctgggcatgcaggccccgatcaaggtgcgc
atcgatcacctccgcccgacggaggagatcgaggctgagttcttccccgacggctgggag
aagggccagtcctggatggctgacaccacgctgggacgaatcctgttcaacgagatgctg
ccgttcaacttcccgtaccaggaaggcgcgatggtgcgcaagggtggcggttccggcaag
gtgctgcttggcgacgtcatccagtccatggtggagaagtacccgatgatcaccgtggcg
cagacgctggacaagatgaaggatgccggtttctactgggcaactcgctccggcgtgacc
atctccatgtccgacgttctggttctgccgaacaaggttgaggtcctggagcagtacgag
cgcgaggccgaggagatcgagcgcaagttctgggagaagggtgccctgaccgaggagaac
cgctacgaccgtctggtcgagctgtggcaggacgccactaacaaggtcggccaggccgtc
gaggacctgtacccggatgacaacccgatcccgatgatcgtgaagtccggtgcggccggc
aacatgcgccagatctggacgcttgcgggcatgaagggcatggtcgtgaactcgcgcggt
gagtacatcacgcgcccgatcaagacctccttccgcgagggtctgagcgtgatggagtac
ttcaacaactcccacggttcgcgcaagggcctggccgataccgctctgcgtacggccgac
tccggttacttgacccgccgccttgtcgacgtcgctcaggacgtcatcgtccgtgaggac
gactgcggcacccaccagggtgtcaaggtgccagtcgcgcagctcgctggagacaagtgg
gcacgcaacgacctcgtcgagaccagcgtgtctggccgcgtctctgcatccgatgccaag
gacgccgacggcaacgttgtgcttgaggccggctcagacctgactgaagaaaacatcgat
cgcctcgtagcggctggtgtggccgaggtcaaggtgcgctccgtgctgacgtgccagacc
ccgacgggtgtgtgcgcgaagtgctacggcaagtccatggccactggcaagctcgtcgat
atcggcgaggccgtcggtatcgtcgcggcacagtcgattggtgagcctggtacgcagctg
accatgcgtaccttccaccagggtggtgtcggcggtgacatcaccggtggtctgccgcgt
gtgcaggagctgttcgaggctcgcgttccgaagaaccgcgccccgatcgcttccgtggcc
ggaacggtcaccctcgaggacgagggcaacttctggacgctgaccatccacccggatgac
ggctccgacgttgtcgtctacgagaagctgtcgaagcgccagggcctggcccaggtgcgt
cgcccgatggagtccaacccgaatgcgatgatcgagcgctccctgcgcgagggcgatcac
gtcgaggttggcgatcgcctgctgcgcggtgcggctgacccgcacgacgtgcttgaggtg
ctgggccgacgcggcgtcgaaaagcacctcatcgacgaggtgcaggccgtgtaccgcacc
cagggcgtgtcgatccacgacaagcacatcgagatcatcatccgccagatgcttcgccgc
ggaaacgtcatcgactctggtgacaccgagttcctgccgggtaccctggtcgacctcgcc
gaggcgcgccaggtcaacgccgcgacggtggctgacggtggccagccggcggagatgcgt
tccgagatcatgggtatcaccaaggcgtcgctcgcgaccgagtcgtggctgtcagcggcc
tccttccaggagaccacgcgtgtgcttaccgacgccgcgatcaacaagcgctccgacaag
ctcatcggcctgaaggagaacgtgatcatcggtaagctcatcccggctggtacgggtatt
gcgcgctaccgcaacatccaggtcaagccgaccgaggctgcgcgctccgccgcgtacgcg
atcccgtccttcggggactcgatctacggcgacgacggctacggcgagttcacaggcgcg
tccgtgccgctcgacgagtacgggttcgaccaggtgtag
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integrated database retrieval system
