Camelina sativa (false flax): 104698813
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Entry
104698813 CDS
T05044
Name
(RefSeq) nuclear pore complex protein NUP133-like isoform X3
KO
K14300
nuclear pore complex protein Nup133
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104698813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104698813
03036 Chromosome and associated proteins [BR:
csat03036
]
104698813
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104698813
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104698813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
104698813
NCBI-ProteinID:
XP_010412509
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All DBs
Position
1:complement(18809521..18815480)
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AA seq
1302 aa
AA seq
DB search
MFSPLTKRAKQSSRSDRTPRNRAPPPDSPETPTTQNRNTNFISDRPATGTPAPWAPRLSV
LARVSPVNNGERGDDTDQLKPVFVGEFPQLLRDEQSYPGDACVSGGMDTETCLSWFITGS
KLFVWSHLTTLPSRKCVVLELPSCVLTNEESGSGLQDGKSWLVSVVPWDTSAGAASRAAR
SRSPVGIVMCNRKSRAVVYWSDIFSGQEAAPVTSIGSSDEQVVYRSPTGRISSSFIKRQS
NGIKSGRAEYSDLNSLITTAVAAAERLCIAIACSSNGELWQYTCSPTGVKSNQVELNISS
SSVSEGYPRSLIWRFSQGLARESCWQFFMLTDCDVHCFTIEPYPELTVSKVWQHEIVGSD
GDSGIKKDIASQKQIWPLDLQVDDQGKVITVLVATICMDRASSSSYTQYSLLTLQHKSEM
RFADGREERFLEKQGPIQVIIPKARVEDKDFLFSMKLRVGGRPPGSAIILSGDGTATVCY
CHGSSTRLYKFDLPYDAGKVLDASVLSSTDEHEYGAWTVLTEKAGVWAIPEKAVVLGGVE
PPERSLSRKNSSNERSTRDETRMTPYGIDRTAGKEISDIENSGDKGNPKMGFTRQTAREE
ESEALLGQLFENFLLSGKVDGSLEKLSQSGAFDRDGETNVFARKSKSIVDTLAKHWTTTR
GAEIVAMTVISSQLVEKQQKHENFLHFLALSKCHEELCSKQRHSLQIILENGEKLAAMIQ
LRELQNLINQNRSARFGSPHAGEDQVSCALWDLIQFVGERARRNTVLLMDRDNSEVFYSK
VSELEEVFYCLNRQLEYIIRADQPLGTQVQRACELSNACVTIFQTALDYKNEHQMWYPPL
EGLIPWHSQPVVCNGLWCIASFMLHLLTEGSRIDISAKSDIYMHLEVLTEVLLEAYAGST
FAKLEMEDEKKGLRNEYWARRDTMFDSLYQQAKEFMEAKIQGIRDRTERTDEDIFRNRCS
NLLSIAKRHAGYNIMWRICYDLNDTGLLKNLMHEGVGQQGGFSYFVFQQLYDMKQFSKLL
RLGEEFQNELLIFLKRHSDLLWLHQAFLHQFSSASDTLNTLALAQDEESMTPIEERAVPE
PEDVQPTFADRKRFLNLSKIAYVADKDADSESKVKRIEADIQLLKLQEEITKALPNGEAK
NRLFRPEELIEICLSIQGRWTAIKAFEVFAWTSCSFRENHESLLEECWRNAADQDDWDRL
HQASTNEGWSDKETLQNLSNTALFQASQRCYGPTRVNSFDGDFAQVLSLRRENPEDSTSS
VEEVLMSHKDFAEAGKLMLTAIMLGCVEEEGIVAEEFLSPME
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgttctctccattgacgaagagagctaagcaaagctctcgcagtgacagaactccacga
aatcgagcccctccgccggattctccagaaactccgacaactcaaaatcggaacactaat
ttcatctcagatcgtccagccactggaactcctgctccttgggctcctcgtttatctgtt
ctcgctagagtttctcctgtaaacaatggtgaaagaggagatgatacagatcaattgaag
cctgtattcgttggagagtttcctcaattgttgcgagatgaacaaagttatcctggtgat
gcttgtgtctccggtggtatggatacagaaacttgtctttcttggtttatcactgggagt
aaactttttgtatggagtcatttgacgaccttaccgtcgagaaaatgcgttgttcttgaa
cttccttcttgtgttttgactaatgaagagtctggtagtggtttacaagatggtaaaagc
tggttggttagtgttgtcccttgggatacctccgctggtgcagcaagtagggctgctcga
tctcgtagtcctgttggtattgttatgtgtaataggaaatctcgagctgttgtgtattgg
tctgacatcttttctggtcaggaagctgcccctgttactagtattggatcttctgatgaa
caggttgtttatcgttcacctacaggcagaataagctcatcattcataaagcgacaaagc
aatgggattaaaagcggcagagcagaatatagcgatctcaattctttgattactactgca
gtagctgcagctgaacgcctttgtattgctattgcttgcagttctaatggtgagctatgg
caatatacttgtagtcctacaggtgttaagagtaatcaagtagagttgaacattagctct
tcctccgttagtgaagggtatccaaggtccttgatctggcgtttttcacaaggattggca
agagagtcttgttggcagtttttcatgttgacagattgtgacgtacattgttttactatt
gaaccttatcctgaactgactgtttcaaaagtctggcaacatgagattgttggcagtgat
ggtgattcaggtatcaagaaagatatagctagtcaaaagcaaatttggcctctagatctg
caggtagatgatcagggtaaagtgattactgttcttgttgccactatctgcatggaccgt
gccagcagttctagctatacacaatattctcttttaaccttgcaacataaatctgagatg
agatttgcagatgggagagaggaaaggtttctggagaaacaaggtccaatccaagtcata
atcccgaaagcaagggtggaggataaagactttttattctctatgaaactcagagttggt
ggtagacccccagggtcagctataattctgtcaggtgatggaacagccacagtttgctac
tgtcatggaagttctacccgtctctacaagtttgatttaccttatgatgctggcaaggtc
ttggatgcttcagttctttcctcaactgatgaacatgaatatggtgcatggactgtgtta
actgagaaagcaggagtatgggcaattccagagaaagcagttgtgcttggtggagttgaa
cctccagagagaagtttgtcacgcaaaaatagttccaatgagaggtctacacgagacgag
acaaggatgacaccatatggcattgatagaactgccggaaaggagatttctgacatagag
aatagtggagataaaggaaaccctaaaatgggatttactcgtcaaacagcccgtgaagaa
gaatcagaagctttgcttggccagctctttgagaattttctgttatctgggaaagttgat
ggatccttggagaagcttagtcaatctggtgcatttgatagagatggagagaccaatgtt
tttgctcgcaaaagcaaatctatagttgacacattagctaagcattggacaacaactaga
ggggctgagatagtagcgatgactgttatatcttcacaattggttgagaaacaacagaag
catgagaattttctacattttcttgctctatccaaatgccatgaggagctgtgctctaaa
cagagacattctttgcaaataattctggaaaatggtgaaaaacttgctgccatgattcaa
ctccgggaactgcaaaatttgattaaccagaatcgctcagccagatttggctctccgcat
gctggggaggatcaagtgtcatgtgccctttgggatcttattcaatttgtaggggagaga
gctcggagaaataccgttctcttgatggacagagataattctgaagttttctacagcaag
gtatctgaacttgaggaagtattttattgtctaaacaggcaactagagtacataatcaga
gctgaccaaccactaggaactcaagtgcagagagcctgcgaactctcaaatgcatgtgtt
acaatttttcagactgccttagattacaaaaatgagcatcaaatgtggtatccaccactt
gaaggtttaataccttggcactctcagcctgttgtatgtaatggactgtggtgcattgcg
tcctttatgcttcatctgttaactgagggatctaggattgatatatctgctaaatcagat
atatacatgcatctcgaagtacttaccgaagttttacttgaggcttatgccggttctacc
tttgcaaaattggaaatggaagacgaaaaaaaaggtctgcgtaatgagtactgggctcgg
cgggataccatgtttgactccctttatcaacaagctaaagagtttatggaagcaaaaatc
cagggcatcagagacagaactgaaaggacagatgaagatatcttcagaaaccgttgttca
aatttgctatcgattgcaaagcgacatgccggctataacattatgtggaggatatgttat
gatcttaatgatacagggctgctcaaaaacttaatgcatgagggtgtgggacaacaagga
ggattcagttactttgtgttccagcaactctatgatatgaaacagttctctaagcttcta
cggcttggagaagaattccagaatgagctactgatatttctaaagcgtcattctgatctg
ctgtggcttcatcaggcgtttcttcatcaattctcatctgcttctgacactcttaataca
ttggctctagcacaagatgaagagtctatgacacctatagaagaaagagcggtgcccgaa
cctgaagatgtacaaccaacattcgcagaccgcaagcggtttctgaacctttcaaagata
gcctatgtggcagataaggatgctgattccgaatcgaaagtgaagcgcattgaagctgat
atccagttactgaagctgcaggaagaaataacaaaagccttgccaaatggagaagctaaa
aacaggctgttccgacccgaggagctcattgaaatttgtctcagtatccaaggccgatgg
acagctataaaagcttttgaggtgtttgcatggacgagctgttcattccgtgaaaatcat
gagagtcttttagaagaatgctggagaaatgctgcggatcaagatgactgggacaggctc
catcaagcctctactaatgaaggttggagcgacaaagaaacattacagaatctaagtaac
actgcccttttccaggcttcccaaaggtgttacggaccaacccgagtcaacagttttgat
ggggattttgcacaagtcctttccctgagaagagagaaccctgaggattcaacttcttcc
gtagaggaagtgttgatgagccacaaagatttcgccgaggcagggaaacttatgctaact
gcaatcatgctgggttgtgtagaagaagagggtattgtagcagaagagttcttatctcct
atggagtaa
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