Camelina sativa (false flax): 104698818
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Entry
104698818 CDS
T05044
Name
(RefSeq) putative CCR4-associated factor 1 homolog 8
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104698818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104698818
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104698818
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104698818
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
PRIMA1
Motif
Other DBs
NCBI-GeneID:
104698818
NCBI-ProteinID:
XP_010412512
UniProt:
A0ABM0SKK6
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Position
6:8698691..8699599
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AA seq
298 aa
AA seq
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MSSIKDCLRNYRFIAFDTEFPGSLRDTPQHASDDQRYTDMSYSVDRTKLIQLGLTLFDSN
GRVGGTWEINFSDFGDAEDARNEKSIEFLKRNGLDLKKIRAQGIEIDGFFNDLSWILKRT
GNITWVTFHGSYDIAYMLKCFTGGESLPVTAAMFAKAVARTLGSVFDLKAIAGRYEGLGC
RLGLEHLADALGLDRVGTAHHAGSDSELTARVFVKMTKIFHDVQEAEGFVYGLGYRIISD
RLKRRQQKQIHLAMMTRCYGPPPPPPPPPPPFPLLNPIFVPGFPPFGDFGYGPSLCMY
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgatcaaagattgtttaagaaactaccgttttatagcgtttgatacagagttt
ccaggtagtttaagggatacaccacaacacgcttcggatgatcaacgttacaccgacatg
agttacagcgtagacaggacgaaactgatccagttaggtctaactctgttcgacagcaac
ggaagagtcggtggaacttgggagatcaacttctctgatttcggagatgctgaagacgcg
agaaacgagaaatccatcgagttcctaaaacgcaacggtctagatctgaagaagattagg
gcccaaggaattgaaatcgacggttttttcaatgatctctcttggattctgaagaggacg
gggaacatcacttgggtgacgtttcacgggtcgtatgatatcgcgtatatgttgaagtgt
ttcaccggaggagagtctttacccgtgactgctgccatgtttgcgaaagccgtagctaga
accctcggctctgtttttgatctgaaagctatagcgggtagatacgaaggacttggttgc
cgtttaggtttagagcatctagcagatgcgttgggacttgaccgtgttggtaccgctcac
cacgccggttcagatagcgaattaaccgctagggttttcgttaagatgactaagatcttc
cacgatgtgcaagaggctgaaggctttgtttatggactcggctatagaatcatctctgat
cgtctaaagcgcagacaacaaaaacagatccaccttgcgatgatgaccagatgctacggt
ccacccccaccaccaccgcctcctccaccgccgtttccgctactcaatccgatctttgtt
cctgggtttcctccttttggtgattttggctatgggcctagcttatgtatgtattaa
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