Camelina sativa (false flax): 104698831
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Entry
104698831 CDS
T05044
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
csat
Camelina sativa (false flax)
Pathway
csat04142
Lysosome biogenesis
csat04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
104698831
04148 Efferocytosis
104698831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104698831
Membrane trafficking [BR:
csat04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104698831
Hops complex
104698831
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS18_solenoid_2nd
VPS11_C
Clathrin
TPR_Vps41
zf-C3H2C3
Beta-prop_WDR36-Utp21_1st
zf_RING_Vps8_fungal
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
104698831
NCBI-ProteinID:
XP_010412524
UniProt:
A0ABM0SKM4
LinkDB
All DBs
Position
1:18826207..18830877
Genome browser
AA seq
932 aa
AA seq
DB search
MYQWRKFDFFEEKYGGKIPDDVTGDIQCFSSGRGKVVIGSNDGSVSFLDRGIKFDSGFQA
HSSSVLFLQHLKQRNFLVTVGEDEQISPQQSGICLKVFDLDKVQEESTSSSTPECIGILR
IFTNQFPEAKITSFLVLEEVPPILLIAIGLDNGCVYCVKGDIARERITRFKLQVDGRSPI
TGLGFRMDGQALLLFAVTPDSVNLFSMLAQPPKLQTLDHIGGSVNTVTMSDRSELIVGRP
EAVYFYEVDGRGPCWAFEGEKKFMGWFRGYLLCVIADPKTGKNVFNVYDLKNRLIAYSIV
VDKFSHMLCEWGNVLLITADKSLLCITEKDMESKLDMLFKKNLYTVAINLVQSQHADAAA
TANVMRKYGDHLYGKQDFDEAMSQYINTIGYLEPSFVIQKFLDAQRIYNLTNYLEKLHEK
GLASKDHTTLLLNCYTKLKDVEKLNTFIRKEDGIGELKFDVETAIRVCRAANYHEHAMYV
AKKAGKHEWYLKILLEDLGNYDEALQYVSSLEPSQAGVTIKEYGKILIEHKPKETIDILM
RLCTEQGTSNGVYLSMLPSPVDFINVFVQHPHSLMHFLERYAEIVKDSPAQAEINNTLLE
LYLSRDLNFPSISLSENGLDQDTTDHSVAAAAAKAHPEKRTNADSKDAMEKDCTERQKKG
LELLKMAWPSDLEQPVYDVDLAIILCEMSSFKEGLLYLYEKMKLYKEVIACYMQNHDHEG
LIACCKRLGDSGKGGDPSLWADLLKYFGQIGEDCTKEVKEVLTYIERDDILPPIIVLQTL
AKNPCLTLSVIKDYIARKLEQESKIIEEDRRAVEKNQETTKNMRKEIEDLRTNARIFQLS
KCTACTFTLDIPAVHFMCMHSFHQRCLGDNEKECPECAPEYRSVMEMKRSLEQNSNDQDL
FFQQVKGSKDGFSVIAEYFGKGIISKTSDATS
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagtggagaaaattcgatttcttcgaagagaaatacggaggtaagatacctgat
gatgtgaccggagatatacaatgtttttccagtggccgtggcaaagtcgtcatcggctct
aacgacggatccgtcagcttcctcgatcgcggcatcaagttcgattccggtttccaagct
cactcttcctccgtcctcttcctccaacacctcaagcaaaggaacttcctcgttaccgtc
ggagaagatgaacaaatatcgccgcagcagtcagggatatgtctcaaggtgtttgacctt
gacaaagtgcaagaagagagcactagttcttcgactcccgagtgcattggtattctaaga
atattcaccaatcagtttcctgaagctaagattacgtcttttctagtcttggaggaagtt
ccaccaatattgcttatagccattggtttagataatggctgtgtttattgtgtcaaagga
gacattgcacgagagcgtatcactcggtttaagcttcaagtggatggacgatcccctatt
acaggcttggggttcaggatggatggtcaagcgcttcttttatttgcagtaactcctgac
tcggtgaacttgttcagtatgctggcgcagccacctaaactgcagactttggatcatatt
ggtggcagtgtgaatactgttacaatgagtgaccgctcggaactaatagttggtcgacct
gaggctgtttatttctatgaagttgatggacgtggtccttgctgggcttttgaaggagag
aaaaaattcatggggtggttccgtggctatcttttatgtgtcattgctgaccctaaaact
gggaagaatgttttcaatgtctacgaccttaagaaccggcttatagcatatagcatagtc
gttgataaattctcccatatgctctgcgagtggggaaacgtattacttataacggctgac
aaatcattgttgtgcattaccgagaaggatatggaaagcaagttagatatgctgttcaag
aaaaacctgtacacagtagccattaatcttgtccagagtcagcatgccgatgctgctgct
actgccaatgtgatgaggaagtatggtgatcatttatatggcaaacaggactttgacgaa
gctatgtctcagtacatcaacacaattggttaccttgaaccatcatttgtgatacaaaag
tttctggatgcacagaggatctacaatcttacgaattacctggagaagttgcatgagaag
ggtctagcatcaaaagaccacacaactcttttgctaaactgttacactaagttgaaggat
gtagaaaagctgaacacattcattagaaaagaagatggcatcggcgaactgaagttcgat
gtggaaacagccattagggtctgtcgtgcagccaattaccacgagcatgcaatgtatgtt
gcaaaaaaggcaggaaaacatgagtggtatctgaaaattttgcttgaagatcttgggaac
tacgacgaagcgctgcaatatgtttcaagtcttgaacccagtcaagctggggttacaata
aaagagtatggtaagattcttattgagcacaagccaaaagagactattgatatactcatg
cgactctgcactgagcaagggacttctaatggtgtgtacctgtccatgttgccatcacct
gtggactttatcaatgtgtttgttcaacatccacattcattaatgcattttctcgagaga
tatgctgaaatagtgaaggattcacctgctcaagctgaaatcaataacacactcttggag
ttatacttgtccagggacttgaattttccatcaatctctctatctgaaaatggtctagat
caggacacaacagatcattcagtagcagctgcggcggctaaagctcatcctgaaaagagg
acaaatgctgattcaaaggatgcaatggagaaggattgtacagaaagacaaaagaaggga
ctggagttgctgaaaatggcatggccgtcagacctagagcaacccgtctatgatgttgac
cttgctataattctttgcgagatgagttcgttcaaggagggactgttgtatctttatgaa
aagatgaaactttacaaagaggttattgcttgctacatgcagaatcatgatcatgaggga
ctaattgcatgctgcaaaagattaggtgattctggcaagggtggggatccatctctttgg
gcagatcttctcaagtattttggtcaaattggagaggactgcaccaaagaggtgaaggag
gttcttacttatattgaacgggatgatatcttacctcctatcattgttcttcagaccttg
gcaaagaatccctgccttacactctctgtcatcaaagactatatagccaggaaacttgaa
caagaatcaaagataattgaagaggaccggcgtgcagtagagaagaatcaggaaacgaca
aaaaacatgagaaaagagattgaagacctcaggacgaatgccagaatatttcaacttagc
aagtgcaccgcgtgcactttcacattggatatcccagcagtccatttcatgtgtatgcac
tcatttcatcaacgctgccttggtgacaatgaaaaagaatgccccgagtgtgctcccgag
tacagatctgtgatggaaatgaagagaagtttggagcagaactcgaatgaccaagatctg
tttttccagcaagtgaaaggctcgaaagacgggttttctgtgattgcagagtactttggg
aaaggaatcatcagcaaaactagtgatgcaacatcttga
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