Camelina sativa (false flax): 104698917
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Entry
104698917 CDS
T05044
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104698917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104698917
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104698917
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
U-box type E3
104698917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
zf-RING_UBOX
zf-Nse
HEAT_2
MCAfunc
zf-C3HC4_4
KAP
RPW8
HEAT_EZ
zf-C3HC4
zf-C3HC4_2
Arm_2
zf-NOSIP
Motif
Other DBs
NCBI-GeneID:
104698917
NCBI-ProteinID:
XP_010412596
LinkDB
All DBs
Position
6:complement(11092867..11099049)
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AA seq
554 aa
AA seq
DB search
MEEEKATAAQSLIDVVNEIAAISDYRITVKKLCYNLARRLKLLVPMFEEIRESNEPISEV
TLANLVGLKEAMSSAKDYLKFCSEGSKIYLVMEREQVTRKLLEVSVKLEQSLSQIQYEDL
DISDEVREQVELVLSQFRRAKGRVDVSDDELYEDLQLLCNKSSDVDSYQPALERVAKKLH
LMEIPDLAQESVALHEMVASSGGDVGANIEEMAMILKMIKDFVQTEDDNGEEQKVNFRSN
GQTSTAASQKIPVIPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQ
ALTSTTLTPNYVLRSLIAQWCEANDIEPPKPPSSYRPRKVSSFSSPAEANKIEDLMWRLA
YGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLS
ICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLV
VLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVFHAVQCTL
SHVSSSKLTMLIIW
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagagaaagctactgctgcacagagcttaatcgatgtagtaaacgagattgcg
gcgatttccgattacaggattacggtgaagaagctttgttataatctagcgaggagattg
aagctgcttgttcctatgtttgaggaaattagagaaagcaacgagccgatcagcgaagtt
actttggctaatttggttggtttgaaagaagcgatgagttctgctaaggattatctcaaa
ttctgcagcgaagggagcaagatttatctggtcatggagagggaacaagtgacacgtaaa
ttgctggaggtgtctgttaagttagaacagtctttgagccagattcagtatgaggatctc
gacatttctgatgaagttagagaacaggttgagctggttctcagccagtttaggcgagcg
aaaggaagagtagatgtatcagatgatgaactatatgaagatcttcagttgctgtgtaat
aaaagtagtgatgtagattcttatcagcctgccctagagcgggttgcaaagaagttacat
cttatggagattcctgacctagctcaagaatcagtggctctgcatgaaatggttgcttcg
agcggtggagacgttggtgcaaacattgaggagatggcaatgattctgaagatgattaag
gattttgtgcagactgaggatgacaacggcgaggagcagaaagttaacttcagaagtaat
ggacaaacttctactgcagcaagtcagaagatacccgtgattcctgatgatttccgctgt
ccgatatcgctggaaatgatgagagatccagttattgtttcatcagggcagacgtacgaa
cgcacctgcattgagaagtggatagaaggtggacactcaacatgtccaaaaacacagcag
gcgctaacaagcacaaccctcacaccaaactatgttctccgtagtctcatagctcagtgg
tgcgaggccaacgatattgagcctccaaagccaccaagcagttacagacccagaaaagtt
tcgtccttctcgtctccagcagaagcaaacaagatcgaagatctaatgtggagactcgct
tacggaaaccccgaggaccaacgttctgccgctggagaaatccgccttcttgcaaaacga
aatgcagacaaccgcgtggccatagccgaagctggtgccatacctcttctcgtaggcctc
ctctcaactcctgattctcgtatacaagaacattcagtaacagcccttttaaacctctcc
atatgtgagaacaacaaaggagccattgtttctgctggagctattcctggtatagttcaa
gtactcaagaaaggaagcatggaagccagagagaatgcggcggctacacttttcagtcta
tcagtgattgacgaaaacaaagtgactattggtgccttgggagcgattcccccacttgtt
gttctgcttaatgaagggacacaaagaggcaagaaagatgccgctactgcactctttaac
ctctgcatataccaaggaaacaaaggaaaagccatacgtgcaggagtgattcccacgttg
actagactcttgacagagcccggaagcggaatggtattccatgctgtacagtgtacatta
tcacatgttagcagttcgaaattgactatgctaattatttggtga
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