Camelina sativa (false flax): 104699286
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Entry
104699286 CDS
T05044
Name
(RefSeq) protein CTR9 homolog isoform X1
KO
K15176
RNA polymerase-associated protein CTR9
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104699286
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
104699286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_14
TPR_19
TPR_11
TPR_17
TPR_16
TPR_CcmH_CycH
TPR_6
TPR_9
TPR_7
ANAPC3
ARM_TT21_C
TPR_10
ARM_TT21_5th
Fis1_TPR_C
NatA_aux_su
SPOB_a
UBA_N4BP1
Motif
Other DBs
NCBI-GeneID:
104699286
NCBI-ProteinID:
XP_010412917
UniProt:
A0ABM0SLC8
LinkDB
All DBs
Position
1:complement(19303039..19312999)
Genome browser
AA seq
1088 aa
AA seq
DB search
MASVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIEQFR
QILEEGSSSEIDEYYADVKYERIAILNALGAYYSYLGKTETKHREKEEQFILATQYYNKA
SRIDMHEPSTWVGKGQLLLAKGEIDNALQAFKIVLDTAPDNVPALLGQASVEFNRGRFSE
SLQLYKRALQVFPGCPAAVRLGIGLCRYKLGQLDKARQAFDRVLQLDPDNVEALVALGIM
DLQANDSIGMRKGMERMQQAFEIYPYCASALNYLANHFFFTGQHFLVEQLTETALAVTTH
GPTKSHSFYNLARSYHSKGDYEKAGMYYMAAIKETNNKPQEFVFPYFGLGQVQLKLGELK
GSVFNFEKVLEVYPDNCETLKALGHLYTQLGQTEKALEYMRKATKLDPRDAQAFVGLGEL
LIPSDTGAALDAFKMARTLMKKGGQEVPIEVLNDIGALHFEREEFESALDNFKEALGDGI
WISFLDQKENLEQLGVSVLGYKDTGIFHRLIESGHSVDVPWNKVTTLFNLARLLEQLHKT
EAATFLYRLVLFKYPGYIDAYLRLAASAKAQNNLPLAIELVNEALKVDDKNPNALSLLGE
LELKNDDWVKAKETFRAASDATDGKDSYAILSLGNWNYFAAMRNEKRNPKLEATHLEKAK
ELYTKVLTQHNSNMYAANGSGIVLAEKGQFDIAKDVFTQVQEAASGSVFLQMPDVWVNLA
HVYFAQGNFALTVKMYQNCLRKFFYNTDSQILLYLARTHYEAEQWQECKKTLLRAIHLTP
SNYTFRFDLGAVMQKSSSSTLQKKKRTADEVRSTVAEAENAVRVFTQLSAASDLHVHGFD
SKKIQTHVQYCSHLLEAAKVHREAAEREELQNRQRLEVARQAALAEEARRKAEEQRKYQL
EKRKQEDELRRLKQEEEKFQRIKEQWKTSTPGSHKRKDRVEDDDGEGKPSERRRKKGGKR
RKKDKGSRARHYEDDEEEAVTMDDHNEVEDEDGNTNYNREDEMANQETEEPVDDDALAAA
GLEDPDVDDDEVQVPASVVRRRRALSSSDEEGELMEDQPNSSPQREKEESIREEEGANME
EEEEEEAS
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgtgtacatacctgttcagaattcggaagaggaagttagggttgttcttgat
cagctccctcgagacgcttctgatatccttgatatccttaaagccgaacaagctcctctc
gatctctggctcatcatcgcgagagagtacttcaagcaaggaaaaattgaacagttccgc
caaatactagaggaagggtcaagttctgaaattgacgagtactatgctgatgttaagtac
gagagaatagcaatcttgaacgctctaggtgcgtattacagctacctgggtaaaactgag
accaaacacagagaaaaagaggagcaatttatcttggcaacacaatattataacaaagca
tccagaatcgatatgcatgaaccttccacttgggttgggaaaggtcagctcttactggct
aagggtgaaatagataatgcacttcaggcttttaagattgtgttagacactgcccctgat
aatgttcctgctcttctgggtcaggcttctgtagagtttaaccggggacgtttttccgag
tcattacaactatacaagagggccttgcaagtatttcccgggtgtcctgcagctgtgaga
ttgggaattggtctttgtcgttataagttggggcaactagataaagcacggcaagcgttt
gatcgtgttctgcagctagatcctgataatgttgaggctcttgtggcacttgggatcatg
gatttgcaagcaaatgattctataggaatgaggaaaggaatggagagaatgcagcaagca
tttgagatttatccctattgcgcatcagccctaaattatttggccaatcacttttttttc
accggccagcattttcttgttgagcagctgactgaaacggcattagccgtcacaactcat
ggcccaacaaagtcacattctttttacaatttagcacggtcatatcatagcaagggggac
tatgaaaaggctgggatgtactatatggcagccatcaaagaaactaataataagccacaa
gaatttgtatttccttactttggtttgggtcaagtacaactaaagttgggggagcttaaa
ggatctgtatttaactttgagaaagtattagaagtctatcctgataactgcgagacgctg
aaggctctaggacacttatacacccagcttggacaaactgagaaggcccttgagtacatg
cggaaggccacaaaactcgatccacgtgatgcccaggcatttgttggccttggtgagctg
ctgataccgtctgacacaggggctgcacttgacgccttcaaaatggcacgaaccctcatg
aaaaagggaggccaagaagtgcctatagaagtcctaaatgatattggtgctttacatttt
gagagagaagaatttgagtctgcgcttgataattttaaggaggctctgggtgatggaata
tggattagcttccttgatcaaaaagaaaatttagaacagttgggtgtatctgttctagga
tacaaggatactggcattttccataggctgattgaaagtggtcactctgtcgatgtacct
tggaataaagttacaactttgtttaacctggctagattacttgagcagctacacaaaaca
gaagcagcgacttttctgtatcggctggtacttttcaagtatcctggctacatagatgct
tatttgaggcttgctgcgagtgcaaaagctcagaacaatcttcctctggccattgaactg
gtgaatgaagctctgaaagtggacgataagaatccaaatgcgttgtctctgcttggtgaa
ttggagcttaagaatgatgactgggttaaggcaaaggaaacctttcgagctgctagtgat
gcaactgatgggaaggactcatatgctattctttcactggggaactggaattatttcgcg
gcaatgcgcaatgagaaaagaaatccaaaattagaagctacacatctggagaaggccaag
gaactctatacaaaagtcctgactcaacataattccaacatgtatgctgccaacggctct
ggcattgtattggcagagaaaggccaatttgatattgccaaggatgtttttactcaggtt
caagaagctgcaagcggaagtgtatttcttcagatgcctgatgtatgggtgaatctggct
catgtctactttgctcaagggaattttgccttaaccgtgaaaatgtatcaaaactgcttg
cggaagttcttttacaacacagactctcaaattcttctttacttagcccgtacccattat
gaggctgagcagtggcaagagtgcaaaaagacactattaagggccattcacttgactcct
tcaaattacacattcagatttgatttgggtgctgtaatgcagaaatcatcatcttccaca
ctgcaaaagaaaaaaagaacagctgacgaggtacgctcaacagttgcagaagcagagaat
gctgttcgtgtattcactcaattgtctgctgcttcagacctccatgttcatgggtttgat
agcaaaaaaatacaaacccacgttcagtattgctcgcacctgctggaagcagcaaaagtt
caccgtgaagcagctgagcgtgaggagctgcagaaccgacagagactagaagttgctcgt
caggctgctttggcagaagaagcacgccgtaaagctgaagaacagaggaaataccagttg
gagaaacgaaaacaggaggatgagctgagacgcctaaagcaagaagaagaaaaatttcaa
cgtataaaggaacaatggaaaacctccactcctggatctcataagcggaaggatagagtg
gaagatgatgatggggaaggtaagcccagtgagaggagaagaaagaaaggcggaaagaga
agaaagaaggacaaaggctcaagggctcggcactacgaggatgatgaagaagaagctgtt
actatggatgatcacaatgaagtggaagatgaagatggtaacactaattataacagggaa
gatgagatggcgaatcaagaaactgaggaacctgtggatgatgatgctctagcagctgct
ggtctcgaagatcctgatgttgatgatgatgaggtacaggtgcctgcttcggttgtgaga
cgaagaagggcgctatcatcatcagatgaagaaggtgaattgatggaggatcagccaaat
tcaagcccccagagagagaaagaagagagcattagggaagaagaaggtgctaacatggag
gaagaagaggaggaagaggccagttga
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