KEGG   Camelina sativa (false flax): 104699286
Entry
104699286         CDS       T05044                                 
Name
(RefSeq) protein CTR9 homolog isoform X1
  KO
K15176  RNA polymerase-associated protein CTR9
Organism
csat  Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:csat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csat03021]
    104699286
Transcription machinery [BR:csat03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    PAF1 complex
     104699286
SSDB
Motif
Pfam: TPR_1 TPR_2 TPR_12 TPR_8 TPR_14 TPR_19 TPR_11 TPR_17 TPR_16 TPR_CcmH_CycH TPR_6 TPR_9 TPR_7 ANAPC3 ARM_TT21_C TPR_10 ARM_TT21_5th Fis1_TPR_C NatA_aux_su SPOB_a UBA_N4BP1
Other DBs
NCBI-GeneID: 104699286
NCBI-ProteinID: XP_010412917
UniProt: A0ABM0SLC8
LinkDB
Position
1:complement(19303039..19312999)
AA seq 1088 aa
MASVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIEQFR
QILEEGSSSEIDEYYADVKYERIAILNALGAYYSYLGKTETKHREKEEQFILATQYYNKA
SRIDMHEPSTWVGKGQLLLAKGEIDNALQAFKIVLDTAPDNVPALLGQASVEFNRGRFSE
SLQLYKRALQVFPGCPAAVRLGIGLCRYKLGQLDKARQAFDRVLQLDPDNVEALVALGIM
DLQANDSIGMRKGMERMQQAFEIYPYCASALNYLANHFFFTGQHFLVEQLTETALAVTTH
GPTKSHSFYNLARSYHSKGDYEKAGMYYMAAIKETNNKPQEFVFPYFGLGQVQLKLGELK
GSVFNFEKVLEVYPDNCETLKALGHLYTQLGQTEKALEYMRKATKLDPRDAQAFVGLGEL
LIPSDTGAALDAFKMARTLMKKGGQEVPIEVLNDIGALHFEREEFESALDNFKEALGDGI
WISFLDQKENLEQLGVSVLGYKDTGIFHRLIESGHSVDVPWNKVTTLFNLARLLEQLHKT
EAATFLYRLVLFKYPGYIDAYLRLAASAKAQNNLPLAIELVNEALKVDDKNPNALSLLGE
LELKNDDWVKAKETFRAASDATDGKDSYAILSLGNWNYFAAMRNEKRNPKLEATHLEKAK
ELYTKVLTQHNSNMYAANGSGIVLAEKGQFDIAKDVFTQVQEAASGSVFLQMPDVWVNLA
HVYFAQGNFALTVKMYQNCLRKFFYNTDSQILLYLARTHYEAEQWQECKKTLLRAIHLTP
SNYTFRFDLGAVMQKSSSSTLQKKKRTADEVRSTVAEAENAVRVFTQLSAASDLHVHGFD
SKKIQTHVQYCSHLLEAAKVHREAAEREELQNRQRLEVARQAALAEEARRKAEEQRKYQL
EKRKQEDELRRLKQEEEKFQRIKEQWKTSTPGSHKRKDRVEDDDGEGKPSERRRKKGGKR
RKKDKGSRARHYEDDEEEAVTMDDHNEVEDEDGNTNYNREDEMANQETEEPVDDDALAAA
GLEDPDVDDDEVQVPASVVRRRRALSSSDEEGELMEDQPNSSPQREKEESIREEEGANME
EEEEEEAS
NT seq 3267 nt   +upstreamnt  +downstreamnt
atggcgagtgtgtacatacctgttcagaattcggaagaggaagttagggttgttcttgat
cagctccctcgagacgcttctgatatccttgatatccttaaagccgaacaagctcctctc
gatctctggctcatcatcgcgagagagtacttcaagcaaggaaaaattgaacagttccgc
caaatactagaggaagggtcaagttctgaaattgacgagtactatgctgatgttaagtac
gagagaatagcaatcttgaacgctctaggtgcgtattacagctacctgggtaaaactgag
accaaacacagagaaaaagaggagcaatttatcttggcaacacaatattataacaaagca
tccagaatcgatatgcatgaaccttccacttgggttgggaaaggtcagctcttactggct
aagggtgaaatagataatgcacttcaggcttttaagattgtgttagacactgcccctgat
aatgttcctgctcttctgggtcaggcttctgtagagtttaaccggggacgtttttccgag
tcattacaactatacaagagggccttgcaagtatttcccgggtgtcctgcagctgtgaga
ttgggaattggtctttgtcgttataagttggggcaactagataaagcacggcaagcgttt
gatcgtgttctgcagctagatcctgataatgttgaggctcttgtggcacttgggatcatg
gatttgcaagcaaatgattctataggaatgaggaaaggaatggagagaatgcagcaagca
tttgagatttatccctattgcgcatcagccctaaattatttggccaatcacttttttttc
accggccagcattttcttgttgagcagctgactgaaacggcattagccgtcacaactcat
ggcccaacaaagtcacattctttttacaatttagcacggtcatatcatagcaagggggac
tatgaaaaggctgggatgtactatatggcagccatcaaagaaactaataataagccacaa
gaatttgtatttccttactttggtttgggtcaagtacaactaaagttgggggagcttaaa
ggatctgtatttaactttgagaaagtattagaagtctatcctgataactgcgagacgctg
aaggctctaggacacttatacacccagcttggacaaactgagaaggcccttgagtacatg
cggaaggccacaaaactcgatccacgtgatgcccaggcatttgttggccttggtgagctg
ctgataccgtctgacacaggggctgcacttgacgccttcaaaatggcacgaaccctcatg
aaaaagggaggccaagaagtgcctatagaagtcctaaatgatattggtgctttacatttt
gagagagaagaatttgagtctgcgcttgataattttaaggaggctctgggtgatggaata
tggattagcttccttgatcaaaaagaaaatttagaacagttgggtgtatctgttctagga
tacaaggatactggcattttccataggctgattgaaagtggtcactctgtcgatgtacct
tggaataaagttacaactttgtttaacctggctagattacttgagcagctacacaaaaca
gaagcagcgacttttctgtatcggctggtacttttcaagtatcctggctacatagatgct
tatttgaggcttgctgcgagtgcaaaagctcagaacaatcttcctctggccattgaactg
gtgaatgaagctctgaaagtggacgataagaatccaaatgcgttgtctctgcttggtgaa
ttggagcttaagaatgatgactgggttaaggcaaaggaaacctttcgagctgctagtgat
gcaactgatgggaaggactcatatgctattctttcactggggaactggaattatttcgcg
gcaatgcgcaatgagaaaagaaatccaaaattagaagctacacatctggagaaggccaag
gaactctatacaaaagtcctgactcaacataattccaacatgtatgctgccaacggctct
ggcattgtattggcagagaaaggccaatttgatattgccaaggatgtttttactcaggtt
caagaagctgcaagcggaagtgtatttcttcagatgcctgatgtatgggtgaatctggct
catgtctactttgctcaagggaattttgccttaaccgtgaaaatgtatcaaaactgcttg
cggaagttcttttacaacacagactctcaaattcttctttacttagcccgtacccattat
gaggctgagcagtggcaagagtgcaaaaagacactattaagggccattcacttgactcct
tcaaattacacattcagatttgatttgggtgctgtaatgcagaaatcatcatcttccaca
ctgcaaaagaaaaaaagaacagctgacgaggtacgctcaacagttgcagaagcagagaat
gctgttcgtgtattcactcaattgtctgctgcttcagacctccatgttcatgggtttgat
agcaaaaaaatacaaacccacgttcagtattgctcgcacctgctggaagcagcaaaagtt
caccgtgaagcagctgagcgtgaggagctgcagaaccgacagagactagaagttgctcgt
caggctgctttggcagaagaagcacgccgtaaagctgaagaacagaggaaataccagttg
gagaaacgaaaacaggaggatgagctgagacgcctaaagcaagaagaagaaaaatttcaa
cgtataaaggaacaatggaaaacctccactcctggatctcataagcggaaggatagagtg
gaagatgatgatggggaaggtaagcccagtgagaggagaagaaagaaaggcggaaagaga
agaaagaaggacaaaggctcaagggctcggcactacgaggatgatgaagaagaagctgtt
actatggatgatcacaatgaagtggaagatgaagatggtaacactaattataacagggaa
gatgagatggcgaatcaagaaactgaggaacctgtggatgatgatgctctagcagctgct
ggtctcgaagatcctgatgttgatgatgatgaggtacaggtgcctgcttcggttgtgaga
cgaagaagggcgctatcatcatcagatgaagaaggtgaattgatggaggatcagccaaat
tcaagcccccagagagagaaagaagagagcattagggaagaagaaggtgctaacatggag
gaagaagaggaggaagaggccagttga

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