KEGG   Camelina sativa (false flax): 104699339
Entry
104699339         CDS       T05044                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 1-like
  KO
K16251  DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
Organism
csat  Camelina sativa (false flax)
Pathway
csat03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    104699339
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csat03021]
    104699339
Enzymes [BR:csat01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     104699339
Transcription machinery [BR:csat03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     104699339
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_3 RNA_pol_Rpb1_5 RNA_pol_Rpb1_1
Other DBs
NCBI-GeneID: 104699339
NCBI-ProteinID: XP_010412959
LinkDB
Position
6:21894104..21903645
AA seq 1920 aa
MEEESSSSEMLEGEIVGITFGLASNHEICVASISESSINHASQLSNPFLGLPLEFGRCES
CGATEPDKCEGHFGYIQLPVPIYHPAHVNELKQMLSLLCLKCLKIKKAKSTSGGLAERLL
GVCCEEASNISIRDRSSDGASYLELKLPSRSRLQAGCWNFLERYGYRYGSNYTRPLLARE
VKEILRRIPEETKKKLTAKGHIPQEGYIIEYLPVPPNCLSVPDVSDGFSSMSVDPSRIEL
KDVLKKVIAITSSRSGETNFESHHAEANGMFRVVDTYLQVRGTAKATRNIDMRYGVSKIS
DSSSSKAWTEKMRTLFIRKGSGFSSRSVITGDAYRDVNEVGIPIEIAQRITFEERVSVHN
ITYLQELVDNKLCLSYTQGSTTYSLRDGSKSHTVLKPGQVVHRRVMDGDVVFINRPPTTH
KHSLQALRVYVHEDNTVKINPLMCSPLSADFDGDCVHLFYPQSLSAKAEVMELFSVEKQL
LSSHTGQLILQMGCDSLLSLRVMLERVFLDKATAQQLAMYGSLSLPPPALRKSSKSGPAW
TVFQILQLAFPERLTCKGDRFMVDGSDLLRFDFGVDAMASIINGIVTSIFLEKGPKEALG
FFDSLQPLLMESLFAEGFSVSLEDLSMSRADMDVIHNLIIREISPMVSRLRLSYEDELQL
ENSIHKVKEVAANFMLKSYSMRNLIDIKSNSAINKLVQQTGFLGLQLSDKKKFYTKTLVE
DMALFCKRQYGRISSSGDFGIVKGCFFHGLDPYEEMAHSIAAREVIVRSSRGLAEPGTLF
KNLMAVLRDIVITNDGTVRNTCSNSVVQFKYGVDSEHGHQGIFEAGEPVGVLAATAMSNP
AYKAVLDSTPNSNSSWELMKEVLLCKVNFQNTTNDRRVILYLNECHCGKRFCQENAAYTV
RNKLKKVSLKDTAVEFLVEYRKQQTISEIFGIDSCLHGHIHLNKTLLQDWNISMQDILQK
CEDVINSLGQKKKKKATDDFKRTSLSVSECCSFRDPCGSKDSDMPCLMFSYNATDPDLER
ILDVLCNTIYPVLLDTVIKVGFFFDGGAMFCQENAAYTVRNKLKKVSLKDTAVEFLVEYR
KQQTISEIFGIDSCLHGHIHLNKTPRRCFEKAAEKCHKDSLSTVVGSCSWGKRVDVGTGS
QFELLWNQKETGLDDQEETDVYGFLQMVRSTTNVDAYVSSPGFDVTEEEMAEWAESPERD
SALGEPKFEDSADFQTIYEEGQPSGSNWEKSSSWDKGCSGGSEWGLSRNTGGEADPESNW
EKTTNVEKEDALSGWNTKKDAQESSKSESNWEKSSSWDNGCSGGPEWGVSKNTGGEADPE
SNWEKTTHVEKEDAWTGWNTKKDAQESSKSDSGAWGLKTKDDDANTTPNWETRPAHTDSI
VPENSEPSSDVWGLKSVSDKSWEKKNWGTESAPAAWGSTDAAVWGSSSKMNSETESDAAA
WGSKDKKNSYIGSGAGVLGPWNKKSLETESDSATWGSSDKTKSGAAAWSSRDRKNMETDS
EPDAWGSQVKKKSDTESGPAAWGAWDTKKSETDLGLAGWGTGDKKNSETESGPAAWGAWD
TKKSETESGLAGWGTGDKKNSETESGPAAWGSWGQPSPTAADNDTNEDDGNPWVSLKETK
SRENDDKERIQWGNPAKKFPSNGSHGSWSNGGGADWKGKRNHTPRPPRSEDNLAPMFTAT
RQRLDSFTSEEQELLSDVEPVMRTLRKIMHLSGYPDGDPISDDDKTFVLEKILNFHPEKE
KKLGSGVDFITVDKHTTFSDSRCFFVVSTDGTKQDFSYRKSLNNYLMTTYPDRAEEFIDK
YFTKPRPSGNRDRNNQDATPPGEEQSQPLTQSIGNGGEDFQTQSQSQSSSQNQTQSQTQT
QSPSQTQAQAQSPSQTQAQSQSLSQNQTQTQAQSPSQTQAQSPSQTQAQAQVQSPSQTQT
NT seq 5763 nt   +upstreamnt  +downstreamnt
atggaggaagaatcttcttcatcagaaatgctagaaggagagattgttggaatcacattt
ggtcttgcaagtaaccatgagatttgtgtagcatcgattagtgaatcttcaatcaatcat
gccagtcaactctctaaccccttcttggggttgcctctggagtttggcaggtgtgaatcg
tgcggtgcgacagagccagataaatgtgaaggtcattttggttatattcagcttccagtg
ccaatataccatcctgctcatgttaatgaactgaaacaaatgctgagccttctgtgcttg
aaatgtctgaagataaagaaggcaaagagcacaagtggtggtctggcggagcgcttatta
ggtgtctgttgtgaggaagcttcaaacatatcaatcagagatagatcatcggatggggcc
tcatatctagaactgaagctcccatctaggtcaagactgcaggcgggttgctggaatttc
ctggaaagatatggttaccgctatggaagcaactatacgcggcccctgctggcaagagag
gtaaaggaaattctaagacggatccctgaagaaacaaaaaagaaactcacagcaaaggga
catattcctcaagaaggatacataatagaatatcttccagtcccgcctaactgtttgtca
gtgccagatgtttctgatggtttcagctccatgtcagtggatccttccagaattgagcta
aaagacgttcttaagaaagtgatagccataacaagctctaggtctggcgagacaaacttt
gagtcgcatcacgctgaagccaatggaatgtttagagtggtggatacctatctgcaggtt
aggggtactgccaaagcaacaagaaacattgacatgagatacggggtgtctaagatctcg
gatagttcatcttcaaaagcttggacagaaaaaatgagaacacttttcatccgaaagggt
tcaggtttctcttcccgtagcgtcatcactggagatgcgtacagagatgtaaatgaggta
ggcatcccaattgaaattgcgcagagaatcacttttgaggaaagggttagtgtccacaac
ataacttatctacaagagttagtagacaacaagttgtgtttgagttatactcaaggttct
acgacctattctttaagggatggatccaagtcgcacactgtgcttaaacctgggcaggtt
gttcatcgcagggtcatggatggggatgttgtgtttatcaaccgacccccgacgacacat
aagcattctcttcaagcgcttcgggtgtatgttcatgaagataacaccgtgaagattaac
cctctgatgtgtagtcccctcagtgctgattttgatggtgattgtgtccatctgttctac
ccacagtcacttagtgctaaggcagaggttatggagctcttctctgtggagaagcaactg
cttagctcccatactggacagctgattttgcagatgggttgtgattctttactgtctttg
agggttatgctggagcgggtgtttctggacaaggcaactgctcaacagttagctatgtat
ggctctctgtctctgccaccaccagcactaaggaagtccagtaaatctggcccagcttgg
acagtttttcagattctacagcttgcctttccagagcgtctgacctgcaaaggtgacaga
ttcatggttgatggaagtgatttgctgaggtttgatttcggggttgatgcgatggcatcc
atcatcaatggcattgtaacttcaatctttctggagaagggtccaaaggaggcacttgga
ttcttcgattcgctacaacctcttttgatggaaagtctttttgctgaggggtttagtgta
agtttggaagacttatccatgtctagggcagacatggatgtgattcacaacctaataatc
cgggagatttcacccatggtgtctcggttgagattatcatatgaagatgaattgcaacta
gagaacagcatccacaaagtgaaggaagtggctgctaactttatgctgaagtcatattcc
atgcggaacttgatcgacatcaagagtaactcagcaatcaacaagctggtgcagcagaca
ggcttcttgggtcttcagctttctgacaagaagaaattctacacgaagactctggtagag
gacatggctctcttttgtaagagacagtacggcaggatttcttcatctggcgattttgga
atagtgaagggctgcttctttcatgggctggatccgtatgaagagatggctcattcaatt
gcagcaagggaggttattgttcgctcttcaagggggttagctgagcctggaactctcttt
aagaatctgatggctgttcttcgggatatcgtaattacaaacgatggaactgtaagaaac
acctgtagtaactcagtcgtccagttcaaatatggagttgattctgaacatggacatcaa
ggtatttttgaggcgggagaacctgttggagtattggcagctactgccatgtcaaatcct
gcgtataaggcagtgcttgattccactccaaatagtaattcatcatgggagctaatgaag
gaagttctgctctgcaaagtcaatttccaaaacactactaatgatcggcgcgtaatccta
tatttaaatgaatgccattgtggaaaaaggttttgccaggaaaatgctgcttacacagtc
aggaacaagctgaagaaagttagtcttaaagatactgcagtggaattcctcgtcgaatac
agaaagcaacaaactatatcagaaatttttggaattgattcatgcctacatggccatatt
catcttaataagacattgttgcaagattggaacatcagtatgcaggatatccttcaaaag
tgtgaggatgtaattaattcactaggacaaaagaaaaagaagaaagctactgacgacttc
aagagaacaagtttgtctgtcagtgagtgctgctctttccgagatccttgtgggagcaaa
gattcagatatgccttgtttgatgttctcctacaatgccaccgatcctgatctagaaaga
attcttgatgttctttgcaatacaatttacccggttctgctggatacagtgatcaaagtc
ggtttcttctttgatgggggtgcaatgttttgccaggaaaatgctgcttacacagtcagg
aacaagctgaagaaagttagtcttaaagatactgcagtggaattcctcgtcgaatacaga
aagcaacaaactatatcagaaatttttggaattgattcatgcctacatggccatattcat
cttaataagacaccaagaagatgttttgagaaagcggctgagaaatgtcataaagattct
ctatcaacagtcgttgggtcttgttcttgggggaaacgcgtggatgttggtacaggttca
cagtttgaacttctatggaaccaaaaagagactggtctagatgatcaagaagaaacagat
gtgtacggcttcctccaaatggtcagatccacgacaaatgtagatgcatatgtgtcttcc
cctggttttgatgttacagaggaagaaatggctgaatgggctgaatcgcccgagcgagac
tctgcccttggagagcctaaatttgaggacagtgccgatttccaaactatatatgaagaa
ggccagccatcaggatccaattgggagaaaagttcttcgtgggataaaggttgcagtggt
ggctcagaatggggactctcaagaaatacaggtggtgaggcagacccggagtctaattgg
gaaaagactacaaatgttgagaaggaagatgccttgtctggttggaacactaaaaaagat
gctcaagaatcttccaagtcagaatccaactgggagaaaagttcttcgtgggataatggt
tgcagtggtggcccagaatggggagtctcaaaaaacacagggggtgaggcagacccggag
tctaattgggaaaagactacacatgttgagaaggaagatgcttggactggttggaacact
aaaaaagatgctcaagaatcttcgaaatcagattcaggtgcttggggcttaaagacaaag
gatgatgatgcaaatacaacaccaaactgggaaacaagaccagctcatacagattctatt
gtcccagaaaatagtgagccgtcttctgacgtttggggactcaaatctgtttcagacaaa
tcttgggagaaaaagaactggggaactgaatcagctcctgctgcatggggttcaacagat
gctgctgtttggggttctagtagcaaaatgaactcggaaactgaatcagatgctgctgct
tggggttctaaggacaaaaagaattcttacattgggtcaggtgctggtgttttgggtccc
tggaacaaaaagagcttggaaactgagtcagatagtgctacttggggttctagtgacaaa
actaaatcaggtgctgctgcatggagttctagggacagaaaaaacatggaaactgactcg
gaacctgatgcttggggttcccaggtcaaaaagaaatctgacactgagtcaggtcctgct
gcttggggtgcttgggacacaaagaaatcggaaactgacttaggtcttgctggttggggt
accggggacaaaaagaattctgaaactgaatcaggtcctgctgcttggggtgcttgggac
acaaagaaatcggaaactgaatcaggtcttgctggttggggtaccggggacaaaaagaat
tctgaaactgaatcaggtcctgctgcttggggttcttggggacagccaagtcccactgca
gcagacaatgataccaatgaagatgatggaaatccgtgggtttccttgaaggagaccaaa
agtagagagaatgatgataaggagagaattcagtggggaaatccagccaagaaatttcca
tctaatggctcacatggtagctggtccaatggtggtggtgcagactggaaaggaaaaagg
aaccatactcctaggccacctagatctgaggataatttggctcccatgtttacagcaacg
agacagcgcttggactcattcacctctgaggagcaagagcttctctcagatgttgagcca
gtcatgaggactctcaggaaaataatgcatctgtctgggtaccctgatggagacccaatt
tctgatgatgacaagacgtttgtcctggagaagattttgaacttccatcccgaaaaagag
aaaaagctcggctctggtgttgatttcatcacggttgataagcacaccacattctcagat
agcaggtgcttctttgttgtttcaactgatgggaccaaacaggacttttcatacagaaaa
tccctcaataactatttgatgacgacataccccgaccgcgctgaagaattcattgacaaa
tactttactaaacctcggcctagcggaaatagagacaggaacaaccaagatgccacacca
cctggggaagaacagtctcagcctctgactcagtctataggtaatggaggtgaagacttt
cagactcagtctcagtctcagtcttcgtctcagaatcagactcagagtcagactcagact
cagtctccctctcagactcaggctcaggctcagtctccatctcagactcaggctcagtct
cagtctttgtctcagaatcagactcagactcaggctcaatctccatctcagactcaggct
cagtctccatctcagactcaggctcaggctcaggttcagtccccgtcccagactcagaca
taa

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