Camelina sativa (false flax): 104699387
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Entry
104699387 CDS
T05044
Name
(RefSeq) polygalacturonase ADPG2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104699387
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104699387
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
104699387
NCBI-ProteinID:
XP_010413001
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Position
6:23113245..23115476
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AA seq
394 aa
AA seq
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YKNSLIKRRDDNTGLKSFVRASLRTPTTVSVSDFGAKGDGNTDDTQAFVNAWKKACSSNG
AVNLLVPKGNTYLLKSIQLTGPCKSILTVQIFGTLSASQKRSDYKDISKWITFDNVNDLS
VEGGATGAVDGNGETWWENSCKRNKAKPCTKAPTALTFYNSKNLRVNNLRVRNAQQIQIS
IEKCSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSNSIIGTGDDCISIESGSQTVQIN
DITCGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIVFQN
IQMDNVKNPIIIDQEYCDKSKCTSQKSAVQVKNVVYRNISGTSASDMAITFNCSKNYPCQ
EIVLDKVNIMGGKATCSNANVVDKGAVLPQCNST
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
tacaaaaatagcttaatcaagcgaagagacgacaacacgggattgaaaagctttgtaaga
gcttctttgcgaactccaaccaccgttagtgtttctgacttcggagctaaaggagatgga
aatactgatgacacgcaggcgttcgtgaatgcgtggaaaaaagcatgctcttcaaatgga
gctgttaatctcttagttcctaaagggaatacttatctccttaagtctattcagttaact
ggtccatgcaaatctattcttaccgttcagatcttcgggacgttatcggcatctcaaaaa
cgatcggattacaaagacatatccaaatggataacgtttgacaacgttaacgatctatct
gttgagggcggcgccactggggctgtggacggaaacggcgaaacgtggtgggaaaactca
tgcaaacggaacaaagctaagccatgcacaaaagctcccacggctcttactttctacaac
tcgaagaacttgagagtgaataatctgagggtgagaaatgcgcaacagattcagatttcg
attgagaaatgctccaacgttcaggtctctaatgtggtggtaactgcacctgccgatagt
cctaacactgatggtatccatatcacaaacacccaaaacattagagtctccaactccatc
attggaacaggcgatgattgcatatctattgaaagtggatcacaaactgttcaaataaat
gacataacttgcggtcctggtcacggaatcagcattggaagcttaggagatgacaactca
aaggcatttgtctcaggcgtgacagtggatggtgctaagctttccggtaccgacaatgga
gttagaatcaaaacttaccagggaggctcaggaactgctagcaacattgtctttcagaac
atccaaatggacaatgtgaagaatccgatcataatcgaccaagaatattgtgacaagagc
aaatgcacttcacagaaatctgcggtccaagtgaagaatgtggtgtaccgaaacataagc
ggcacaagcgcatcagacatggcaataacgtttaattgcagcaagaactatccatgccaa
gagattgtgcttgacaaagtgaacataatgggagggaaagcaacttgcagcaatgccaat
gtggttgataaaggagctgttctgcctcaatgcaactccacttaa
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