Camelina sativa (false flax): 104699435
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Entry
104699435 CDS
T05044
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104699435
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104699435
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GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Pectate_lyase_4
NosD
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
104699435
NCBI-ProteinID:
XP_010413041
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Position
6:24248626..24249415
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AA seq
197 aa
AA seq
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YDXCRKKGGHCPQGARSISFSWCSNVLLSGLTSFNSQNMHVTVHHSSNVRIQNIRIRAPS
GSPNTDGIHIQSSSGVTITGGTIATGDDCIALSQGSRNIWIERVNCGPGHGISIGSLGDY
ANEEGVQNVTVTSSVFTKTQNGVRIKTWARPSRGFVRNVVFRNLIMRNVGNPVIIDQNYC
PNGRGCPRQVNNLVDLA
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
tatgacncatgtagaaagaaaggtggacattgtcctcaaggtgcaaggtccatatcgttt
agctggtgcagtaatgttctactaagtggtctaacgtcgttcaatagccaaaatatgcac
gtcacggttcatcattcctctaatgttcggattcaaaacataagaataagagctccaagt
ggaagccctaacaccgacggtattcacatccaatcttcttctggagtcactattactggc
ggaaccattgcgaccggtgatgactgcattgctcttagtcaaggatctaggaacatttgg
atcgaacgggtgaactgtggacctggacatggaatcagcattgggagtcttggggattac
gctaatgaggaaggtgtgcagaatgtaaccgtaacgagctctgttttcaccaagacgcag
aacggagtaagaataaagacttgggctaggccgagcagagggtttgtgaggaatgttgta
tttcggaatttgataatgaggaatgttggtaatccggtgattatcgatcagaactattgt
cctaatggaagaggatgtcctcgtcaggtgaataatctagtcgatttagcttaa
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