Camelina sativa (false flax): 104699460
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Entry
104699460 CDS
T05044
Name
(RefSeq) spastin-like
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104699460
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
csat04812
]
104699460
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
104699460
Membrane trafficking [BR:
csat04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
104699460
Cytoskeleton proteins [BR:
csat04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
104699460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Vps4_C
AAA_5
AAA_22
NPHP3_N
AAA_16
AAA_14
TIP49
AAA_2
Mg_chelatase
DUF815
RNA_helicase
IstB_IS21
nSTAND3
TniB
AAA_25
ABC_tran
NACHT
AAA_33
AAA_24
DUF4368
Guanylate_kin
AAA_7
Motif
Other DBs
NCBI-GeneID:
104699460
NCBI-ProteinID:
XP_019082412
LinkDB
All DBs
Position
6:complement(25036017..25038431)
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AA seq
354 aa
AA seq
DB search
MSENKRTVASPSSASVSSTASRYRRSSLQKTPVPRGGIAMARNTKDAAASPKPVKESGNV
QDDKLVEMINTTIVDRSPSVQWDDVAGLDGAKQALLEMVILPAKRRDLFTGLRRPARGLL
LFGPPGNGKTMLAKAVASESQATFFNVSASSLTSKWVGEAEKLVKTLFQVAISRQPSVIF
MDEIDSIMSTRSISENEASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLRR
LVKRIYVPLPDSKVRTLLFKTKLKSQPHSLSSSDIGKIVRETEGYSGSDLQALCEEAAMM
PIRELGADILTIQANKVRPLRYDDFRKSMAVIRPSLSKSKWEELERWNSEFGSN
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagaataagagaaccgtagcatctccgtcttcagcttcagtttcctctacagcg
tcaaggtatagaagaagttcattacagaagactccagtccccagaggtggcattgcaatg
gcaaggaacactaaagatgctgctgcaagcccaaaacctgtgaaagaatctggaaatgtc
caggatgataagttagtagagatgataaacacaacaatagtggatagaagcccatctgtg
caatgggatgatgttgctggactcgatggagctaaacaagctttgttggagatggtaatt
ttaccggcaaaacgaagagatttattcactggtctccggagaccagcgagaggtctgctt
ctctttgggccacctggcaatggaaaaacaatgcttgccaaggctgtcgcttctgagtca
caggcaacttttttcaatgtctcagcatcttctttgacttcaaaatgggtgggtgaggct
gaaaagctagttaaaacgctatttcaagttgcaatatccagacaaccttctgtgatattt
atggatgaaatagatagtataatgtctacaaggtcgatcagtgagaatgaagcaagcaga
agattgaaatcagaattccttattcagtttgatggtgtgacttctaatccggatgatttg
gtgattgtcattggagctactaacaagccacaggagttggatgatgcagtacttaggaga
ttggtgaagagaatatatgtaccgttgccagattcaaaagtcagaacactactatttaaa
actaaactgaagagtcagcctcactctttatccagtagcgatattggtaaaattgtcaga
gaaaccgaaggatactcaggaagcgatcttcaagcactgtgtgaagaagctgcaatgatg
ccaatcagagaactcggtgcagatattcttaccatccaagcaaataaagtgagaccgcta
cgatatgatgattttcggaaatcgatggcagtgatcagacccagcttgagtaaaagcaaa
tgggaagagcttgaacgttggaactcagagtttggctctaattaa
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