Camelina sativa (false flax): 104699584
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Entry
104699584 CDS
T05044
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1 isoform X1
KO
K14485
transport inhibitor response 1
Organism
csat
Camelina sativa (false flax)
Pathway
csat04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104699584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104699584
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104699584
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
F-box
LRR_NXF1-5
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
104699584
NCBI-ProteinID:
XP_010413212
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Position
7:330850..337129
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AA seq
594 aa
AA seq
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MQKRVALSFPEEVLEHVFSFIHLDKDRNSVSLVCKSWYEIERWCRRKVFIGNCYAVSPST
VIRRFPKVRSVELKGKPHFADFNLVPEGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVSDD
CLELIAKSFKNFKVLVLSSCEGFSTDGLAAIASTCRNLKELDLRESDVDDVSGHWLSHFP
DTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEEL
GTGGYTAELRPDVYSALSVALSGCKDLKCLSGFWDAVPAYLPAVYSLCSRLTTLNLSYAT
VQSYDLVKLLSQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALT
EQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPL
DVGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGC
DSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKCLGQKMPKLNVEVIDE
RGPPDSRPESCPVERVFIYRTVAGPRFDMPGFVWNMDQDSTMRFSREIITTNGL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagcgagtagccttgtcgttcccagaagaggtgctcgagcacgtgttttcgttt
atacacctggataaggataggaactcggtgtctctggtgtgcaagtcatggtacgagatc
gagcggtggtgccggaggaaagtgttcatcgggaactgttacgccgtgagtccatcgacg
gtgataaggaggttcccgaaagtgagatccgtggagctgaaggggaagcctcacttcgca
gactttaatttggtgcctgaaggatggggaggctacgtgtacccgtggatagaggccatg
tcatcgtcgtacacgtggctggaagagataaggctgaagaggatggtggtgagcgacgat
tgcttggagctcatagccaagtcgtttaagaattttaaggttcttgtgctttcttcctgt
gaaggcttctccaccgatggtctcgctgctatcgcttccacttgcaggaatcttaaagag
cttgatttgcgcgagagtgatgttgatgatgttagtggccactggcttagccatttcccg
gatacatatacttctttggtgtcgcttaatatctcttgcttagcatctgaggtcagtttc
tctgctctggaaaggctcgtcactaggtgccccaatctcaagtctctaaagcttaaccgt
gctgtgcctcttgagaaactggctactttactacaaagagctcctcagttagaggaattg
ggcactggtgggtacactgctgaattgcgaccagatgtttactctgctttatctgttgcg
ctttctggctgcaaggacttgaagtgcttatctggattttgggatgctgttcctgcctat
cttccagctgtttattctctttgcagtcgcctcactactttgaatttgagttatgcaact
gtccagagctatgatcttgtcaagcttcttagccaatgtccaaaactgcagcgcctctgg
gtgcttgactacatcgaggatgctggtctggaggtgcttgcttcaacctgcaaggactta
cgcgagttaagagtgtttccgtctgagccttttgtcatggaaccaaacgtggcattaacg
gaacaggggcttgtctccgtctccatgggctgtccaaaactcgagtcagttctctacttt
tgccgtcaaatgaccaatgctgcattgataaccattgctaggaaccgtcccaacatgact
cgcttccgtttgtgcatcattgagccgaaagcccccgactatctgactttagagccactg
gatgttggatttggagccatagtagagcattgcaaagatctccgtcgcctctctttatca
ggcctcttgacagacaaggtttttgaatacattgggacatatgccaagaagatggaaatg
ctctcggtggcgtttgcaggagacagtgacttgggcatgcatcatgttttgtcagggtgc
gatagcctgaggaaactagagataagggactgcccgtttggagacaaggcgcttttggcc
aatgcttcaaagctggagacaatgcgatccctttggatgtcttcttgttccgtgagtttt
ggagcctgcaagtgtctaggacagaagatgccaaagctcaatgtggaagtcatcgatgaa
cggggtccaccagactcaagacccgagagctgccctgttgagagagtgtttatatacaga
acagtggctggtcctcggtttgacatgcctggcttcgtctggaacatggaccaagactca
acaatgaggttttccagggaaatcatcactactaatggattataa
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