Camelina sativa (false flax): 104699670
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Entry
104699670 CDS
T05044
Name
(RefSeq) transformation/transcription domain-associated protein-like
KO
K08874
transformation/transcription domain-associated protein
Organism
csat
Camelina sativa (false flax)
Pathway
csat03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104699670
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
csat01001
]
104699670
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104699670
03036 Chromosome and associated proteins [BR:
csat03036
]
104699670
Protein kinases [BR:
csat01001
]
Serine/threonine kinases: Other
PIKK family [OT]
104699670
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
104699670
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
104699670
STAGA complex
104699670
TFTC complex
104699670
TIP60 complex
104699670
SAGA complex
104699670
SLIK complex
104699670
NuA4 complex
104699670
Chromatin remodeling factors
ASTRA complex
104699670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tra1_ring
FAT
PI3_PI4_kinase
FATC
Pox_J1
TPR_21
Motif
Other DBs
NCBI-GeneID:
104699670
NCBI-ProteinID:
XP_010413315
LinkDB
All DBs
Position
1:19824564..19831984
Genome browser
AA seq
1779 aa
AA seq
DB search
MIINFLIRVALVIEPKDRETNTMYKQALDLLSQALEVWPNANVKFNYLEKLLSSMPPSQS
DPSTALAQGLDVMNKVLEKQPHLFIRNNISQISQILEPCFKHKMLDAGKSLCSLLKMVFT
AFPLDAVNTPPDIKLLYQKVNELINKHVNTVTAPQASGDDNSFGSISFVLLVIKTLAKVH
KNFVDSYVLVRILQRLARDLGSAVGSHPRQGQRPDSDSAVTSSRQTADVGAVICNIKSVL
ELIDETVMLIADCKRSVTQILNTLLSEKGTDASVLLCILDMIKRWVEDDFSKTGTSGLSG
SFLTQKDVVTFLNKLSYIDKQHFSSDALEEWDQKYLQLLYGLCADSTKYPLGLRQEVSLK
VERHFMLGLRASDPEMRRKFFLLYHESLGKNLFARLQYIIQIQDWEALSDVFWLKQGLDL
LLAILVEDKPISLAPNSARVLPLLPSDSPGIQHQAPANLEGPEEVTAMFDSIVMKHAQFL
SATSKLQVADVVIPLRELAHTDANVAYHLWVLVFPIVWVTLLKEEQVALAKPMISLLSKD
YHKKQQGHRPNVVQALLEGLQLSHPQPRMPSELIKYIGKTYNAWHLALALLESHVMLFMN
DTKCAESLAELYRLLNEEDMRFGLWKKRSITAETRAGLSLVQHGFWQRAQSLFYQAMVKA
TQGTYNNTVPKAEMCLWEEQWLHCASQLSQWDALVDFGKSIENYEILLDSLWKLPDWAYL
KDHVIPKAQVEETPKLRLVQSYFALHDRNSNGVGDAENTVGKGVDLALEQWWQLPEMSVH
ARVPLLQQFQQLVEVQESARIHVDIANGSKGTGNVAVGGLGNRYADLKDILETWRLRTPN
EWDNMTVWYDMLQWRNEMYNVVIDAFKDFATSNSPLHHLGFRDKAWNVNKLARIARKQGL
YDVCVQILEKMYGHSTMEVQEAFVKIREQAKAYLEMKGERASGLNLINSTNLEYFPDKIK
AEIFRLKGDFHLKLNDTESANIAYSNAITLFKNLPKGWISWGSYCDMAYQETQEEIWLEY
AVSCFLQGIRFGVSNSRSHIARVLYLLSFDTVNEPVGRVFDKHLEQVPHWVWLSWIPQLL
LSLQRTEAPHCKLVLLKIAAVFPQALYYWLRTYLLERRDAVNKSELSRLVLAQRMQQNAS
GASAGHGGSNLPSETQIHQGSQISGPSGTHDSGNAHGQDSDRSTAENNVHTGSDQPMHQS
SSGINDNNENTARRNVASLAISAAGAFDAAKDIMEALRGKHNNLASELEVLLTEIGSRFV
TLPEERLLAVVNALLHRCYKYPTATTAEVPQPLKKELSGVCRACFSADAVTKHVEFVKEY
KQDFERHLDPESTSTFPDTLAELTARLKKWKNILQSNVEDRFPAVLRLEDESRVLRDFSV
VDVEIPGQYFADQEIAPDHTVKLDRVGADVPIVRRHGSSFRRLTLIGSDGSQKHFIVQTS
LTPNARSDERILQLFRVMNQMFDKHKESRRRHIGIHTPIIIPVWSQVRMVEDDLMYNTFL
EVYENHCARNDREADLPITHFKEQLNQAISGQISAEAIGDLRLQAYIDITKTLVNDSIFS
QYMYKTLMSGSHMWAFKKQFAVQLAVSSFMSFMLQIGGRSPNKVLFAKNTGKMFQTDFHP
AYDANGMIEFNEPVPFRLTRNMQAFFSQFGVEGLLMSSMCSAAQAVISSKQNEHLRYQLA
MFFRDELLSWFGRRPLGVPIPPVGGIATLNSAELKHKVNANVEDVIGRIRGIAPQYFSEE
DENTVEPPQSVQRGVNELVEAALSPRNLCMMDPTWHPWF
NT seq
5340 nt
NT seq
+upstream
nt +downstream
nt
atgatcattaattttctcataagagtagcattggtaattgaacctaaggacagagaaacc
aacaccatgtacaaacaagcgttagatttgctttcacaagctttggaggtttggccaaat
gccaatgtcaagttcaactatttagaaaaactgctgagcagcatgccaccatctcagtca
gatccgtcaacagcacttgctcagggattggatgtcatgaacaaagttctggagaagcag
cctcatcttttcattaggaacaacatcagccagatttcgcagattcttgaaccgtgtttc
aaacacaagatgctcgatgctggtaaatcattgtgctccttgctgaagatggtcttcact
gcattccccctggatgccgtcaatacacctcctgacataaagctattgtaccagaaagtc
aatgagctaataaacaaacatgtgaatactgttactgctccacaagcttcaggagatgat
aactcttttggttcaataagctttgtacttcttgtcatcaaaaccttggccaaggtgcat
aaaaactttgttgattcatatgtgttggtgcgtatccttcagcgccttgcacgggacctg
ggatcagcagtgggttctcatcctagacaaggccagcgaccagactcggattctgcagta
acttcttctcgtcaaactgctgatgttggagcagtcatatgtaatataaagtcggtcttg
gaacttattgatgaaacggtcatgcttatagcagattgcaaaagatctgttactcaaatt
ttgaacacattgctttccgaaaagggtacagatgctagtgtgcttctctgcatactagac
atgataaaaaggtgggttgaggatgatttcagcaaaacaggcacatctggtttgtctggt
tctttccttacccaaaaggatgtagttacttttctcaataagctttcttatattgataag
caacacttctcatctgatgctttggaagagtgggatcagaagtatcttcagctgttatat
ggactttgtgccgattcaacaaagtatcctctgggcctacgacaagaggtctctctgaaa
gttgaaagacattttatgcttggtttaagggcaagtgatcctgagatgagaaggaagttc
ttcttgttatatcacgagtcacttggaaaaaatttgttcgcgcggttgcagtacattatt
caaattcaggattgggaagctttaagtgatgtattttggctcaaacaaggtcttgatctc
cttttagctatcttagttgaggacaagccaattagcctggccccaaattccgcgagggta
ctaccacttttaccttcagatagtcctggaatacagcatcaagctcctgctaacttagag
ggtcccgaagaagttactgcaatgtttgacagtatagttatgaagcatgcacaatttctg
agcgcgaccagcaaacttcaggtggctgatgtggtcatccctttaagggagctggctcac
acggatgccaatgttgcatatcatttgtgggtcttggtatttccaattgtatgggtaacc
ctgctcaaggaagaacaggtagcattggctaaacctatgatttctctactatcgaaggac
taccataagaagcagcaaggacaccggccaaatgttgttcaagcacttctggaagggctt
cagttgagccaccctcaacctaggatgcctagtgagcttatcaaatatattggaaaaacg
tacaatgcgtggcatctcgcattggcgttgctagagagccatgtgatgttgttcatgaat
gacacaaaatgtgctgagtctcttgctgagctttatcgtttgttaaatgaagaagatatg
agatttgggttgtggaagaagagatccatcactgctgaaacgagagctggactttcatta
gttcagcatggtttttggcagcgtgcccagagcctcttttaccaggcaatggttaaggca
acccaaggcacgtataacaacacagtccctaaagcagaaatgtgtctgtgggaggagcag
tggctccactgcgccagtcagcttagtcaatgggatgccctggtagattttggaaaaagc
attgagaattatgaaatactgcttgatagtctttggaaattacccgattgggcatatttg
aaggatcacgttataccaaaggcacaagtggaagagactccaaagcttcgtttggttcaa
tcttattttgcccttcatgacagaaattcaaatggtgttggagatgccgaaaacacagtg
gggaaaggcgttgatcttgccttggaacagtggtggcagttgcctgaaatgtctgttcat
gctagagtgcctctattgcagcaattccaacaactagttgaggttcaggagtctgctaga
attcatgttgacatcgcaaatgggagtaaaggcacaggaaatgttgcagttggtggactt
ggaaatcgttatgcagatctgaaggatattcttgagacttggaggctgaggactccaaat
gaatgggataatatgacagtctggtacgatatgctacagtggaggaatgaaatgtataat
gttgttattgatgcatttaaggactttgctacttcaaattctccacttcatcaccttggt
tttcgtgacaaagcatggaatgtcaataagcttgccaggatagctcggaaacaagggctt
tatgatgtttgtgttcagattcttgaaaaaatgtatggacactcaactatggaagtacag
gaagcttttgttaaaattagagagcaagcaaaagcatatctggaaatgaagggagagcgt
gctagtggtcttaatctgatcaatagcacaaatttggagtattttccagataagatcaaa
gcagagatatttcgtctgaagggggattttcatttgaaattaaatgacaccgaaagtgct
aatattgcatattccaatgctatcaccctgttcaagaatttacccaaaggatggataagc
tggggaagctattgtgatatggcataccaagaaacacaagaagaaatatggcttgaatat
gctgtcagttgctttcttcagggtataagatttggagtttccaattccagaagtcatata
gctcgtgttctttatcttcttagctttgatacagtgaatgagcctgttggcagagtgttt
gataaacacttagagcaagttcctcactgggtatggctttcttggatcccacagctgtta
ctttccctacaaagaacagaagcaccccattgcaaattggttttattgaaaattgctgca
gttttcccacaggctctctattactggttgcgcacatacttgctggaacgacgtgatgca
gtaaataaatccgaacttagcagattggttttggctcaaagaatgcagcaaaatgcctct
ggtgcaagtgcaggccacggtggaagcaatttaccatcggaaactcaaatccatcaaggc
agtcaaattagcgggcccagtggaacacatgacagtggtaatgcacatgggcaagatagt
gaccgctccactgcggaaaataatgtccataccgggagtgatcaaccgatgcaccaaagc
agctccggtatcaatgataacaatgaaaacacagcgaggcggaatgttgcatccctagca
atctctgcagcgggagcttttgacgctgctaaagatatcatggaagctcttaggggtaaa
cataacaatttagccagtgaactcgaggttcttctcacagaaataggttcaagattcgtt
acattaccggaagaaagactgctggcggttgtgaatgctctgttgcatcgttgttacaag
tatccaactgctaccactgccgaggttccccaaccactcaaaaaagagctgtcgggtgtc
tgcagagcttgtttctcagcagatgctgtaaccaagcatgtcgaatttgtgaaagagtac
aaacaggattttgagcgtcaccttgatccggaaagtacatctacatttccagacacactc
gctgagctgacggcgcgactgaaaaagtggaaaaatattcttcagagcaatgttgaagat
aggtttccggctgtgttaagattggaagatgagagcagggttttgcgtgacttcagtgtt
gttgatgtggagataccagggcagtactttgctgaccaggaaatcgcacctgatcataca
gtaaagttggatagggttggagcagacgttcctatcgttcgaaggcatggaagcagcttc
aggcggttgactctgattggctctgatggctcgcaaaagcactttatagtccagacatca
ttgacgcctaatgctagaagtgatgaacgcatcttgcagcttttccgtgtaatgaatcaa
atgtttgataagcataaagaatcaagacggcgacacattggaattcacactccaatcatc
attcctgtctggtctcaggtccggatggttgaggatgatctcatgtacaacactttcctt
gaggtctatgagaatcactgtgcacgaaatgaccgggaggcagatcttccaattacccac
tttaaggagcaacttaatcaagctatatcagggcaaatctcagcagaggcaataggagat
cttcgtctgcaggcttatatagacatcacaaaaactttggtcaatgacagtatcttctct
cagtacatgtacaagacgttgatgagcggaagccatatgtgggctttcaagaaacaattt
gcagtccagctagctgtctccagtttcatgtccttcatgctacaaatcggtgggaggtcc
ccgaacaaggtcttgtttgcaaaaaacactgggaaaatgttccagacagattttcaccct
gcttatgacgccaacgggatgatagaatttaacgaacccgtgcctttccgcctcacaagg
aacatgcaagcattcttctctcagtttggggtcgaaggtctcctcatgtcatccatgtgt
tcagcagctcaagcagtaatctcctccaagcaaaacgaacatctacggtatcagcttgct
atgttcttccgtgatgaattgctgtcttggtttggaagaagacctcttggtgtgccgatt
cctcctgttggaggaattgctacactgaactcagcggagctgaagcacaaagttaacgcc
aatgtggaagatgtcattggacggatcagaggaatagccccacagtacttttcggaagag
gatgagaacacggttgagccgccgcagtcagtgcaaagaggtgtgaacgagttggtggag
gcagccttgtcgcctcgcaacttatgtatgatggatccaacatggcacccttggttctaa
DBGET
integrated database retrieval system
