Camelina sativa (false flax): 104699696
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Entry
104699696 CDS
T05044
Name
(RefSeq) serine/arginine-rich splicing factor RS31 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104699696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104699696
Spliceosome [BR:
csat03041
]
Common components
Common spliceosomal components
SR proteins
104699696
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RNA_bind
SET_assoc
RRM_5
DbpA
RRM_fung
DUF2129
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
104699696
NCBI-ProteinID:
XP_010413337
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All DBs
Position
7:893762..896000
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AA seq
258 aa
AA seq
DB search
MKPVFVGNFEYETRQSELEKLVGKYGRVDRVDMKTGFAFVYFEDERDAEDAIRKLDNFPF
GYEKRRLSVEWAKGERTRSRGDSKAALYQKPRATDTLFVINFDPIRTKEHDIEKHFEPYG
KVINVRIRRNFSFVQFETQEDATKALEATNKSEILDRVVTVEYAKGGDERNDRYGGARSP
RRSRSPVYRRRPSPDYGRRPSPDYGRPRSPEYDRYKGPAAYERRRSPDYGRRSSDYGRQR
SPGYDRYRSRSPVPRGRP
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagtgttcgtcgggaatttcgagtacgaaactcgccagtcggaattggaaaaa
ttggtcggaaagtatgggagagtcgaccgagttgacatgaaaactggatttgcttttgtg
tactttgaggatgaacgtgatgctgaagacgcaattcgcaagcttgacaattttcctttt
ggatatgagaaacgcaggttatcagtcgaatgggcaaagggggaacgcaccaggtctcgt
ggtgatagcaaggctgctttatatcagaagcctagggctacggatacactgtttgtcatt
aactttgaccccataagaacaaaagagcacgacattgaaaagcactttgagccctatggt
aaggtcattaatgtgcgtatcagacgcaacttctcatttgttcagtttgaaacacaagaa
gatgccacaaaagcccttgaagctactaataaaagcgaaatattggatagggttgtcact
gtggagtatgcgaagggtggtgatgaaagaaatgatcgatatggcggtgctcgtagcccg
agaagatctcgtagtcctgtgtaccgtaggcgtccaagccctgattatggtaggcgtcca
agtccagattatggtcgtcctcgaagcccagagtacgacaggtacaaaggtccagcagct
tatgaaagacgcaggagtccagattatggacgtaggagttctgattatggtagacaaaga
agtcctggttatgaccgttaccgaagtcgctctccagtcccaagaggaagaccatga
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