Camelina sativa (false flax): 104699703
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Entry
104699703 CDS
T05044
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
csat
Camelina sativa (false flax)
Pathway
csat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
104699703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104699703
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
104699703
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Motif
Other DBs
NCBI-GeneID:
104699703
NCBI-ProteinID:
XP_010413344
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All DBs
Position
7:930193..932825
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AA seq
661 aa
AA seq
DB search
MEGRDDGGGKVQGLIEKATKSTAKEVDPRLLKAIKSIVRYSDSEVRFASQTLMELMRHNH
SQVRYLTLFIIDELFMRSKLFRTFIIENLDQLLSLSVGFRSNLPLPAPPAVATMLRSKAV
EFLEKWNLSFGLHYKELRLGFDYLKNTRKLKFPDLQANAARVQRERQEREMKTREILRGK
FDSLRDSFGLLKHKIDVTIKEIKECMEIVQWRGDDGVPLAILDEEDFEEIRCSHLRQIRL
DSLKQSEKVEETSENRVVFDVLREQCKLLVTKHLISVQEGISLLIRVDVSDNRTRDSMLK
DLIDIRNSILAAQKKWEEAGFTISSMPGCHENGETNEEEEEDIWEEDDGKVRTDSVKKVA
PVTISQQSKNSSLPSSSDANRSTSESRSTKKVGSSGDSLRDKLISEAPVMNWGSHLSNWD
STAEVRSNYRGLELESHWGRVDQDAVIPAEKIAELNLQVTVYREERTETPPCRALKKGGL
CQRRDLRTCPFHGPIVPRDDEGNPIIQESPVDVIENQTSSTTGINQDVPMDVTTSDSDPN
QLARQIAKQALKNIREKDKEVMRKRAKLVKVKVKEHNQEVLRDAAIASTSRSSVIDEEFD
RVFAARKNKKQTFSSMRRKKTSAKDRISQRLFSNRVKGTTNPQQLAQGNDEKCRETSANQ
W
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggaagggagagatgacggcggaggaaaagttcaggggttgatagagaaagcgacgaaa
tcaactgctaaagaggttgacccgaggctactcaaggccatcaaatctattgttcgctat
tctgattcggaggtccgattcgcttcgcaaaccctaatggagctcatgagacataaccac
tctcaggttcggtatctgacgcttttcatcatcgacgagcttttcatgaggtcaaagctc
tttagaacttttattattgagaaccttgatcagctgttgagtttgagtgttggttttaga
agcaatctccctcttcctgcacctcccgctgttgccactatgttgcgttctaaggctgtt
gagttcttggagaagtggaatttgtcttttgggttacattacaaggagcttaggcttggt
tttgattaccttaagaacacccgcaagttgaagttccctgatctccaggctaatgctgca
cgtgttcaacgtgagagacaggagagggagatgaagactagagagattttgcgtggcaag
tttgattccttgagggatagttttggactcttgaagcataagattgatgtaacgattaaa
gagatcaaggagtgtatggaaattgttcagtggagaggggatgatggtgttccccttgcc
atcttagatgaggaagattttgaggagatccgttgttctcatcttaggcaaattcgtctt
gattcattgaagcagtcagaaaaggttgaagaaactagtgagaacagagttgtattcgat
gtattgagggaacagtgcaagcttctcgtgacaaagcatctgatctcggttcaggaaggg
atctctcttctcatcagggttgacgtgagtgataacagaacgagagattccatgttgaaa
gacttgatcgatatcaggaatagcatattggcagctcaaaagaaatgggaagaagctggt
tttacaatttcaagtatgcctggttgtcatgagaatggagaaacaaacgaggaagaagaa
gaagatatctgggaggaggatgatggcaaggtcagaactgattcagtcaaaaaggtggct
cctgtgacgataagtcagcagagcaagaattcgtctttaccatcatcgagtgacgcaaat
aggtctacatcagaatctaggtccactaaaaaagttggaagcagtggagactctcttagg
gataagctaatttctgaagcgcccgtgatgaattggggatcacacttgagtaattgggac
tcaactgcggaagttcgatctaattaccggggtctagagcttgagagccactggggcagg
gtggatcaagatgctgttattccggctgagaaaatagcagaactgaatcttcaggtaact
gtttatagagaggagagaacagagacacctccatgccgtgctctaaagaaaggtggtctt
tgtcagagaagagatttgcgaacttgtccgtttcacggacccattgtacctcgggatgat
gaagggaaccccataatccaggaatctccagtagatgtgattgaaaaccaaacgtcttca
actacagggatcaaccaggatgtgcctatggatgtaacaacttcagactctgatcctaat
cagttagctaggcaaatagcgaaacaggctctgaagaatatcagggagaaagacaaagaa
gtgatgaggaaaagagcaaagcttgtgaaggtaaaggtaaaggaacataatcaagaggtt
ctgcgtgatgctgctatagcctcaacttctagatcaagtgttatcgatgaagagtttgat
agagtttttgctgcaagaaaaaacaagaaacaaaccttttcctcgatgcgacgtaagaaa
acatcagctaaagatagaatatcgcagagactgtttagtaatcgggtaaaaggtactact
aatccacaacagttggctcagggaaatgatgagaagtgccgggaaacatcagctaaccag
tggtaa
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