Camelina sativa (false flax): 104700090
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Entry
104700090 CDS
T05044
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 3
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104700090
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104700090
Enzymes [BR:
csat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
104700090
Protein phosphatases and associated proteins [BR:
csat01009
]
HAD phosphatases
Fcp/Scp phosphatases
104700090
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
104700090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_CPL3
NIF
BRCT
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
104700090
NCBI-ProteinID:
XP_010413846
UniProt:
A0ABM0SNJ8
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All DBs
Position
7:3085799..3091520
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AA seq
1247 aa
AA seq
DB search
MLAAPSGCSRTLIRMGNDDSLMALGDVEEGEIPDSGNTSIEVVKLNTTVADIGGDVDGAR
VVGSGGGGSSGKPRVWTMKDLLHQYPGYCGYVNSGLSNLAWANAVKNKPLNEGLGMDYEP
RESADKIVIEDSGDEKEEGELEEGEIDLVEESASDENLVARVEEVTESVVLKTVSEVDDD
RIQKERDLENKVKLIRGVLESTSLVEAQTAFEGVCSRLLGALESLRELVSDNDDFPKRDT
LVQLSFASLQTINSVFCSLDNISKDLNKETMSRLLTLVNDHFSRFLSSNQKNEIEAMNQN
LSRSAIALYAGTSSEENVTRMTQTSNGDLFLAKKLSSEGTHRGASYVRSRFPMLPLLDLH
KDHDADSLPSPTRETTPSLPVNVRHTMVKPGFPVGRESQTTDGARVYPYESDALKAVSTY
QKKFGLNSVFKTDDLPSPTPSGEPNDGNGDIGGEVSSSVVRGSNPGTLLIYGQDVPLHSN
FSSRSMPVANAVSSTVPPHHLSIHAISAPTTGATQTVLAVDQTVKPSAKSRDPRLRLAKP
DVASVTINSYSSGDARNLSKVELSADLVNPRKQKAADELFIDGPAWKRQKSDMDAPKAAG
VGGWLEDTEISELPKVDTKPRLIDNGVTSMTTSVLPTSAISVSQKVPTASIDAASLQSLL
KDIAVNPTMLLNLLKMGERQKVPEKALQKPVDPRKAAQLPGSSVPPGVSTPFSVSASNAL
AVNSSKPAGVLQDSSQNSPSDESGSIRMKPRDPRRILHGSTLQRTDSLVEKQSKVNESST
MGTLTNKGKTEDLETPSQLVPRQNINQNGTGKMKISGGKTPDFSAQFTKNLKNIADMVVV
SQQVGNPPATTQSVELKTERDVKHNPSNPNGQEEGLSVSPTSVTAVAGPTRSMNSWGDVE
HLFEGYDDMERVAIQRERVRRLEEQKKMFASQKLSLVLDIDHTLLNSAKFTEVESRHEEI
LRKKEEQDREKPHRHLFRFHHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMA
KLLDPKGVLFNGRVISKGDDGDPIDGDERVPKSKDLEGVMGMESSVVIIDDSVRVWPHNK
MNLIAVERYLYFPCSRRQFGLLGPSLLELDRDEVPEEGTLASSLAVIEKIHKSFFSNTSL
DEVDVRNILASEQRKILAGCRIVFSRIIPVGEAKPHLHPLWQTAEQFGAVCTTQVDEHVT
HVVTNSLGTDKVNWALSRGRFVVHPGWVEASAFLYQRANENLFAINP
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcggctccatctggttgttctagaaccctaattcgaatgggcaacgatgacagt
ttgatggcattgggtgatgtagaggaaggtgagattcctgattcgggtaacacttcgatt
gaagttgttaagctgaatactactgtggccgatattggcggagacgtcgatggagcaaga
gttgttggtagtggtggtggtggttctagtggcaaacctagggtttggacaatgaaggat
ttgcttcatcagtatcctggttattgtggatatgtgaattcgggtttatctaatcttgct
tgggctaatgctgtcaagaacaaacctctcaatgaaggcttgggaatggattatgaaccc
agagagagtgctgataagattgtgattgaagatagtggtgatgagaaagaagaaggagag
ttggaggaaggtgagattgatttggtggaggagtctgcttctgatgagaatttggttgca
agagttgaggaggttactgaatctgtcgtgttgaaaactgttagtgaagtggatgatgac
cgtattcagaaggagagagatttggagaacaaagtgaaactcatccgtggggtattggag
agtacttcgttggtagaagcacagacagcatttgaaggagtttgttcgaggcttttgggg
gctttggagtctttgcgagagcttgtttcagataatgatgattttccgaagagggatact
ttagttcaactgtcatttgcttctcttcaaaccataaactctgtgttttgctcgctggat
aatatttccaaggaccttaataaggagactatgtcaagattgctaactcttgtaaatgac
catttttcccggtttctctcatccaaccagaaaaatgagatagaggccatgaatcagaat
ttaagtcgttctgctattgcactttatgctggaaccagcagtgaggagaatgttactcga
atgactcagacaagtaatggtgatttgtttcttgccaaaaagctgtcttcagaaggtacc
catcgaggtgcttcctacgtaaggagtaggtttcctatgctacctctgctagaccttcat
aaggatcatgatgcagacagccttccatctcccacaagggaaacaacaccaagtttacca
gtaaatgttcgccatacaatggttaaaccaggttttcccgttggtagagagagccaaacc
actgatggtgccagagtctatccatatgagagtgatgcccttaaagcagtttctacttac
cagaaaaagtttggtcttaattcagtatttaagacagatgaccttccaagcccaacacca
tcaggagaacctaatgatggcaatggagacattggtggagaggtttctagttctgttgtt
aggggctccaatccggggaccctcctaatttatgggcaagacgttcctctacactccaat
ttcagttctagaagcatgcctgttgcaaatgctgtatctagcactgttccaccgcatcat
ctgtcaattcatgctatttctgcgccaactactggtgctacgcaaacagttcttgcagtt
gatcaaacagtgaaaccttctgcaaagagtcgagatccaagactacggcttgcgaaacct
gatgttgccagtgtaactattaattcttactcgtccggtgatgctagaaatctttcaaaa
gtagaactttctgcagacttggtgaacccaagaaagcaaaaagccgctgatgaacttttt
attgatgggcctgcatggaaaagacaaaagagtgatatggatgcaccaaaagcagctgga
gttggtggctggctagaggatacagaaatatcagaacttccaaaagtggacaccaagccc
aggctaattgataacggtgtaacatctatgacaacaagtgttttgcccactagtgctatt
tctgtgagccaaaaagtaccgacagcttcaattgacgctgcatcattgcaatctcttctc
aaggatatcgcagtaaatcctacaatgctattgaatctccttaaaatgggtgaaaggcaa
aaggtacctgaaaaagctcttcagaagcccgtggatccaagaaaagcagctcaacttcct
ggctcttccgtgccaccaggggtatctacaccgtttagtgtatccgcatcaaatgcttta
gctgttaattcttcaaagccagcaggagtacttcaggattcttcccaaaactccccctca
gacgaatctggaagcatccgcatgaaacctcgtgatcctcgccgaatcctgcatggaagt
actcttcaaagaacggactctttggtggaaaagcagtccaaagttaacgagtcctctaca
atgggaaccttgactaataagggtaagacagaagacttagaaacaccttcccagcttgtg
ccacggcaaaatattaaccagaatggtaccggcaaaatgaaaatttcgggtggaaagaca
ccagatttttcagcacaattcaccaaaaacctgaaaaatattgctgatatggttgttgta
tcacaacaagttggcaatcccccagcaaccacgcagtcagtagagcttaagacggaaaga
gatgttaaacataatccttcaaatcccaacggccaggaagagggtctgtcagtttcaccc
acatctgtaacggctgtagctggtcccactcgttcgatgaacagttggggagatgtggaa
cacctgtttgaagggtatgatgacatggagagagtagctattcaaagagagagagttcgg
aggttagaggaacagaagaaaatgtttgcatctcaaaagctctctcttgtcttggatata
gaccacacccttctcaattcagctaagtttactgaagttgaatcccgccatgaggagata
ttaaggaagaaggaagaacaagatcgtgagaaaccacatagacatctctttcgcttccac
cacatgggaatgtggactaaattgagaccagggatttggaattttttagagaaggctagc
aagctgtacgagttacatctttacacaatgggcaacaaattgtatgctacagagatggcc
aaactgcttgatcccaaaggggttctctttaatggacgagtcatatcgaaaggagatgat
ggagatcccattgatggagacgaacgagttcctaagagcaaagatttagaaggagtgatg
ggtatggaatcgtctgtggtgatcatagacgactctgtccgcgtgtggcctcataacaaa
atgaatttaatagctgttgaaagatatctttattttccttgtagtagacgacaatttggg
cttctaggtccctctcttcttgagttagatcgtgatgaggtacctgaagagggcacattg
gcatcttcattagcggtcattgagaaaatacataaaagtttcttctcgaacacttcacta
gacgaagtagatgtgagaaatattttagcttccgagcaacgaaagatattggctggttgt
cggattgtatttagtcggataatcccagtgggtgaagccaaaccgcatttgcatcccttg
tggcaaacagctgagcagtttggtgctgtctgcacaacccaggttgatgaacatgtgact
catgttgtcaccaattctcttggtaccgacaaggtaaattgggcactaagcagaggtaga
tttgttgttcatcctggctgggtggaagcatcagcttttctgtaccagagagcaaatgag
aacttatttgccatcaacccgtaa
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