Camelina sativa (false flax): 104700582
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Entry
104700582 CDS
T05044
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104700582
03015 mRNA surveillance pathway
104700582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104700582
03041 Spliceosome [BR:
csat03041
]
104700582
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104700582
Spliceosome [BR:
csat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
104700582
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
104700582
NCBI-ProteinID:
XP_019083068
UniProt:
A0ABM1Q8I0
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Position
7
Genome browser
AA seq
839 aa
AA seq
DB search
MSGGFFRGTSAEQDTRFSNKQAKLMKSQKFAPELENLVDVTKVKMDVMKPWIATRVTELL
GFEDEVLINFIYGLLDGKVVNGKEIQISLTGFMEKNTGKFMKELWTLLLSAQNNSSGVPQ
QFLDAREADTKKKLEAAMQKANHEHDSLRKIDSSVDLKGKNGMEKKPSRDLPEDGRRADE
KNGVKETRRDLISPRRREASRSPLRGSRSRSISKTNSGSRSYSGERKSRSLSRSSDASIS
PRKRRLSNSRHRSRSRSLRRSPSPRRRRIHSAYGSRSRSPIRRHRRSTPERRRQSPPLSR
RRRSPSPFRRRRSPSPPARRRRSPAPPVRRRRSPSPPARSRRSPSPPARSRRSPARHRRS
PLPIRRRRSPSPPARRHRSPSPLYRRNRSRSPLAKRGRSDSQGRSPSPVARRMTPTGARL
PTPPAGQKLPSPPPRRAGLPSPMRFGGSHAANHLESPSPKSLSPPGEKKVVPSPPVRRRS
SLTPAKERGSLSPAGRGEGESPSHVKHSGSMSPVKSRGRSSPSSHVKARSPVRRRSPTPV
DRRRRRFRSADRRRRRSPSSSRSPSRSFSPPVRRRSPSPSRRRQQRDRRSPGHPSEEQDR
EDGIQSSKLLKRTAVQLPDIDKRKQLPEKVPEVRRAEHVKEQERKSSDKIPERRSSRTHG
SEMPPVSPKESLRVENSEGKSQPLSNKVKGSDQVEKEDNSDLDANLSSDSKENIRHHTTD
RKRRKEKRSSREEVSSDDKGSSDSDLEDRKEAKRRRKEEKKTRKEEKKRKREERRRKREE
RRGGKLKHKNQEHSDTSEGDEAETYPKNKKGESDPKRLEIELRNKALESLKAKKAKLDK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcggatttttccggggtacttccgccgagcaggatactcggttctctaacaag
caagccaaattgatgaagagtcagaaatttgctccggagttggagaatttggtggatgtg
accaaagtgaagatggatgttatgaagccttggattgcgactagagtcactgagcttctt
ggtttcgaagatgaagttctcatcaactttatttatggtctgcttgatgggaaggtagtg
aatggtaaggagattcagatatcgctaactggattcatggagaagaatactggcaagttt
atgaaagaactctggacgcttcttctaagcgcacagaataattcaagtggtgttccgcag
cagtttttagatgctagagaagctgacacaaagaagaaactggaagcagcaatgcaaaaa
gcaaaccacgagcatgattcattgaggaaaatagacagcagcgttgatctcaaggggaaa
aatgggatggagaaaaaaccttcaagagatcttccagaggatgggagaagggctgacgag
aagaatggtgtaaaagaaacgagaagggatctgatatctccacgtcgcagagaagcatcc
cgctcaccccttagagggtcacgttctaggtctatcagcaaaacaaattcaggctctaga
agttattctggtgaacggaaatccaggagcttatcacgatcatcagatgcctccatctca
cccagaaagcggagattgtcgaattcaaggcatagatccagatcacgttccttgcgtagg
tctccgtctcctcggcgacgtaggatacattctgcttatggaagcaggtctcggtcacca
attagacgtcacaggcgatctacgcctgagagacgccgtcagtcaccacccctttcaagg
cgtcgccggtctccatcaccctttaggcggcgcaggtcaccatctccgcctgcaaggaga
cgcaggtcaccagccccgcctgtaaggagacgcagatcaccatcaccacctgctagatca
cgcaggtcaccttcaccacctgctaggtcacgcaggtcaccggctagacatcgccgatct
cctctgcccattagaaggcgtaggtctccttcaccaccagctagaaggcacaggtctcca
tctccactctataggcgcaacaggtcgcggtcaccactggctaagcgaggaaggtctgac
tcacaggggaggtctccctcaccggtggctaggcgcatgacacctactggggcaagattg
cctacaccaccggctgggcaaaaattgccttcaccacctcctaggcgtgcaggattacct
tcgccgatgaggtttggaggatctcatgcagccaaccacctggaatcaccatcacccaag
tcactgtcccctcccggtgagaaaaaagtggtaccatctccacctgttagacgacgtagt
tcactgactcctgccaaagagcgaggctccttgtccccagctggacgcggtgaaggagaa
tccccttcacatgtcaaacatagtggatctatgtcacctgttaaaagtcgaggtagatct
tctccttcatctcatgtcaaagcacgctctcctgttcggcgcaggtcaccaacacctgtc
gaccggcgtcgtcgaagatttcgatcagctgacagacgtaggagacggtctccatcctcg
agtagatctccttctaggtcgttctcacctcctgttcgccgtagatctccttctccaagt
agaagaaggcaacagagggacagaagatctcctggacatccatctgaagagcaagataga
gaggacgggattcaaagttccaagctattaaagagaactgcagtgcagttgcctgatatt
gataagaggaaacaattaccggaaaaggtgccagaagttaggcgtgcagaacatgtgaag
gagcaagagaggaagagcagtgataagataccagagaggcgttccagtagaacccatggt
tcagagatgcccccagtttcacctaaggaatcgcttagagtagaaaattcagaaggaaag
agtcagcctctttctaataaggtgaagggcagtgatcaggttgagaaagaggataacagc
gacttggatgcaaacctttcctctgattctaaggaaaatatcagacatcatactacggat
agaaagagaagaaaggagaaaaggtcttcaagggaagaagtatcctcagatgataagggc
agttctgattctgacctggaagataggaaggaggctaaaaggaggaggaaggaagaaaag
aaaacgagaaaggaggagaagaaacgcaagcgagaggagagacgtcgtaaaagggaagaa
cgtcgtggtgggaagctgaaacataagaatcaagagcattctgatacttcagagggcgat
gaagctgagacctatcctaagaataaaaaaggggagtcagatccaaagaggcttgagatt
gagttgcgaaacaaagcactcgagtcactgaaagcaaagaaggcaaaattggacaagtga
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