Camelina sativa (false flax): 104700639
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Entry
104700639 CDS
T05044
Name
(RefSeq) U-box domain-containing protein 12 isoform X1
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104700639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104700639
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104700639
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
U-box type E3
104700639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
zf-RING_UBOX
MLKL_N
Neurochondrin
zf-Nse
Arm_2
zf-C3HC4_4
KAP
MCAfunc
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
104700639
NCBI-ProteinID:
XP_019083090
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All DBs
Position
7:7352816..7355526
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AA seq
654 aa
AA seq
DB search
MAKSKKHKLAQTLIDSVNEIASISDHRAPMKKHCSNLSRRLKLLLPMLEEIRDSCEESTI
PDQVVTALLSLKESLVPAMDLLAFVSQVSKIYLVLERDQVMVKFQKVTALLEQALSGIPY
ENLEISDELKEQVELVLIQLRREIGRGGDAYDDELYSDVMSLYNDTASVTDSDMLRRVAV
KLQLMTITDLTQESLVLLDMVSSSGGDPGDSFEKMSMVLKRIKDFVQTDNPNLDDAPMTL
KSPLQKAHDGDLNLPIPPEDFRCPISLELMIDPVIVSSGQTYERECIKKWLEGGHLTCPK
TQETLTSDTVTPNYALRSLIAQWCESNDIEPPKRPNSSQPSSKASSSSSTSDDEHNKIEE
LLTKLTSQHPEDQRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTVSSDSRIQEHAV
TSILNLSICQENKERIVYSCGAIPGIVHVLQKGSMEARENAAATLFSLSVIDENKVAIGT
AGAIPPLVTLLSEGSQRGKKDAATALFNLCIYQGNKGKAVRAGLVPVIMRLLTETASGMV
DEALAILAIISSHPDGKMVAGAADAVHVMVDFIRSGSPRNKENAAAVLVHLCSWDQQHLI
EAQKLGIMSLLIEMAENGTDREKRKAAQLLNRFSRFNDQQKQSGLGVEDQISLI
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatcaaagaaacacaagttagcccaaaccttaatcgattcagtaaacgaaatc
gcttcgatttcagatcaccgtgcaccgatgaagaaacactgtagcaacctctcccgtcga
ttgaagcttcttcttcctatgctcgaagagatcagagacagctgtgaagaatcaacgatc
cctgaccaagtggtgacggctttgttatctctcaaggaatcgcttgttcctgctatggat
ttgctcgctttcgttagccaagttagcaaaatttacctggtgttggagagagatcaagtg
atggttaagtttcagaaagtgacggctctattggaacaagctctaagtggaatcccttat
gagaatcttgaaatttcagatgagcttaaagaacaggttgagcttgttttaattcagtta
agaagagaaataggaagaggcggtgatgcgtatgatgatgagttatatagtgatgttatg
tctctttataatgatacagccagtgtaacggattctgatatgcttaggagagtagcggtg
aagcttcagttgatgactataactgaccttacgcaagagtctttggttttacttgatatg
gtcagttcgagtggtggagatccaggtgatagctttgagaaaatgtcgatggttctgaag
agaattaaggactttgtgcaaactgataatcctaacttggatgatgctcccatgacactg
aaatcaccgcttcagaaggcacatgatggtgatctaaatttgccgataccgcctgaagat
ttccgttgtccgatttctctagaattgatgattgatccagttattgtttcttcagggcag
acgtatgaacgtgagtgcattaagaagtggcttgaaggagggcatttgacgtgtccaaag
acgcaagaaacgctgacaagtgatactgtcacaccaaactatgctctaagaagccttata
gctcaatggtgtgaatccaatgacatcgaacctccaaagcgtcccaacagttctcaaccg
agtagtaaagcctcatcttcctcctcaacctctgatgatgaacataacaagattgaagaa
ctcctaactaagctcacatcgcaacaccctgaagaccaaagatccgctgcaggagaaatc
cgtcttctagcaaaacagaacaaccataaccgagtcgccattgctgcatcaggcgccatc
cctcttctggtgaatctcctcacggtatccagtgactcccggattcaagaacacgctgtg
acatcgattcttaacctctcgatatgccaagagaacaaagagagaattgtttattcatgt
ggagcgattccaggtattgttcatgtgctccagaaaggaagcatggaagctagagaaaac
gcagcagccacacttttcagcctttctgttatagacgagaacaaagtggcaataggtacc
gcaggagcgatcccgcctcttgtgaccttactgagcgaaggatcacagagaggcaaaaaa
gatgcggcaactgctctgttcaatctctgcatatatcaagggaacaaaggaaaagctgtg
agagccggtttagttcccgtgataatgcgtttactaacagagacggcaagcggaatggtt
gatgaagcacttgctatattagccataatatcgagtcacccggatgggaaaatggtagct
ggagccgctgatgcggttcatgttatggtagattttataagaagcgggtcgccgcggaac
aaagagaacgcagctgcggtattagtgcacttgtgttcatgggatcagcagcatttgatt
gaagctcagaaattagggattatgagtcttttaatagaaatggctgagaatggtactgac
agagaaaaacgcaaagcggcacagttacttaaccgctttagccgttttaacgaccagcag
aaacagtctggtttaggtgtcgaagatcaaatctctctaatctga
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