Camelina sativa (false flax): 104700730
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Entry
104700730 CDS
T05044
Name
(RefSeq) chaperonin 60 subunit alpha 1, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104700730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104700730
03110 Chaperones and folding catalysts [BR:
csat03110
]
104700730
03029 Mitochondrial biogenesis [BR:
csat03029
]
104700730
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104700730
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
104700730
Messenger RNA biogenesis [BR:
csat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
104700730
Chaperones and folding catalysts [BR:
csat03110
]
Heat shock proteins
HSP60 / Chaperonin
104700730
Mitochondrial biogenesis [BR:
csat03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
104700730
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104700730
Exosomal proteins of other body fluids (saliva and urine)
104700730
Exosomal proteins of breast cancer cells
104700730
Exosomal proteins of colorectal cancer cells
104700730
Exosomal proteins of bladder cancer cells
104700730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Ribosomal_L29
Motif
Other DBs
NCBI-GeneID:
104700730
NCBI-ProteinID:
XP_019083114
LinkDB
All DBs
Position
7:8398523..8406691
Genome browser
AA seq
587 aa
AA seq
DB search
MASANALSSASVLCSSRQSKLGGGSQQQGQRVSYNKRPNRRFSVRANVKEIAFDQHSRAA
LQAGIDKLADCVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDAMENAGAALIRE
VASKTNDSAGDGTTTASILAREIIKHGLLSVTSGANPVSLKRGIDKTVLGLIEELQKKAR
PVKGRDDIKAVASISAGNDDLIGSMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEID
RGYISPQFVTNPEKLLAEFENARVLITDQKITAIKDIIPILEKTTQLRAPLLIIAEDVTG
EALATLVVNKLRGVLNVVAVKAPGFGERRKAMLQDIAILTGAEYLASDMSLLVENATIDQ
LGIARKVTISKDSTTLIADAASKDELQARIAQLKKELFETDSVYDSEKLAERIAKLSGGV
AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATLVHLSTAIPAIKETFEDA
DERLGADIVQKALVAPAALIAQNAGIEGEVVVEKIMFSEWELGYNAMTDTYENLLEAGVI
DPAKVTRCALQNAASVAGMVLTTQAIVVDKPKPKAPAAAAAPEGLMV
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgctaacgctctctcttcagcctccgtcctctgttcttcccgtcagagtaag
ttaggaggaggaagtcagcagcaaggtcagagagtaagctacaacaagaggccaaacaga
cgttttagtgttagagcaaatgtaaaggaaattgcttttgaccagcactctagagctgct
cttcaagctggtattgacaagcttgctgattgtgttggtctcactcttggccctagaggg
aggaatgttgtgttggatgaatttggaagtcctaaagtggtgaatgatggagtcaccatt
gcaagggctattgagttacctgatgccatggaaaacgctggtgccgctcttattcgtgag
gttgcgagtaagactaatgactcggctggtgatgggacgaccactgcgtctatccttgct
cgggaaatcattaaacacggattgttgagcgtcacctctggtgcgaatcccgtttccctc
aagagaggaattgataagactgtgctaggtctgatcgaagagcttcagaagaaagctagg
ccggtgaaaggtcgtgatgacatcaaagctgttgcttctatctctgctggaaatgatgac
cttatagggtcaatgattgctgatgccattgacaaagttggacctgatggtgttttgtcc
attgaatcatcatcctcttttgagaccactgtcgaagttgaagaagggatggagattgac
agaggttacatctcgcctcagtttgttacaaaccctgagaaactactagctgagtttgag
aacgctagggttttgatcactgatcagaagatcactgcaatcaaagacatcatccctata
ttagagaagaccactcagcttcgagctccattgttgattattgcagaggatgttactggt
gaagccttagctacccttgtcgtgaacaagctccgtggtgtccttaacgtcgttgccgtt
aaagctccaggatttggagaaagaagaaaagccatgcttcaagatattgcaatcttgaca
ggagctgagtacctagccagtgacatgagcttgctggttgaaaatgcaaccatagatcaa
ttgggtattgcccgtaaagtgacgattagcaaagactcgactaccctcattgcagatgca
gcttccaaggacgagttacaagctcggattgctcagctgaagaaagaattattcgagact
gattcagtatatgactcagagaagctcgctgagagaatcgctaagctatctggtggtgtt
gctgtcattaaagtcggtgcagcaaccgaaactgagcttgaagaccgtaagctccgtatc
gaggatgcaaagaacgcaacatttgctgctattgaggaaggtatagttccaggtggtggt
gctactttggtccatctctccactgctattcccgccattaaggagacctttgaggatgct
gatgaacgtttgggagctgatatagtacaaaaggcattggtggcaccagctgcacttatt
gcacagaatgctggaatcgaaggagaggttgttgtcgaaaagattatgttcagcgaatgg
gagcttgggtacaacgcaatgactgatacatacgagaatctgttggaagctggagtgatt
gatccggcgaaagtgacaagatgtgctctacagaacgctgcttccgtagcaggaatggta
ctgaccactcaggccattgttgtcgacaaaccaaaacccaaggctcctgctgctgctgct
gctcctgagggtctcatggtgtaa
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