Camelina sativa (false flax): 104700792
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Entry
104700792 CDS
T05044
Name
(RefSeq) nuclear pore complex protein NUP98B-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104700792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104700792
03036 Chromosome and associated proteins [BR:
csat03036
]
104700792
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104700792
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104700792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Prion_octapep
Motif
Other DBs
NCBI-GeneID:
104700792
NCBI-ProteinID:
XP_010414681
LinkDB
All DBs
Position
7:complement(9308752..9315347)
Genome browser
AA seq
996 aa
AA seq
DB search
MFGSSNPFGQSSNNSPFGTQTQSLFGQTNNNPSNNPFAVKPFGNSTPFGAQTGSSMFGGT
STGVFGAPQTSSSPFGASSQAFGSSTPAFGASSAPAFGSSTSPFGGTSTFGQKSFGLSTP
QSSPFGSTPQQSQPAFGNSSFGSSSPFGASSTPAFGASNTSAFGASNTSAFGATSTPGFG
ASSTPAFGSTNTPAFGASSTPSFGASSSPAFGASPAPAFGSSGTGFGNNAFGAGGAFGAS
STPAFSASSTPAFGASSTPAFGASSTPAFGASSTPSFSFSSSPAFGQSTSAFGSSAFSST
QSPFGAQGAQASTPIFGGQTTIGGEQGGSRVMPYAPTNEAESGTGNPGRLQSISAMPVYK
EKNQEELRWEDYQRGDKGGQRPAGQSPGGAGFGVTTSQPSVFSPSPTFGQTSPNPTNPFA
QKTSITTPNLSSPFGQPTTPSFGQPTTPSFGQPTTPSFGQPTIPSMFGSTASNATSVFGS
SPSFATNTQQPFGSAPAHGSNSAFSMGGNNNNSQSSPLFGSNPLFGQSTTPAFQQTSSAF
GLNTTPTFQQTSSVNGQNTNPANGQSNIFSTPSTGSANLFSSSFTTSISPFGQTTPALST
PYQSVQPTQPSGAFSFNNFAQTQTANTTGVTGGTGTLSQSNFKQVPAFGNSAIMQPTPVT
NPFGTLPALPQVSIGQGRNSPSIQYGISSMPVVDKPAPVRVSPLLTSRHLLQRRVRLPTR
KYRPGDDGPKVPFFSDEENSSTPKADALFIPRENPRALFIRPVERVKSEHRKDGPAPLQE
NGNKSNGVTNGANHENKNNGETCEAPPVKANQKPNGTHENHGGDKNGSPSGADIETLMPK
LHHAEYFTEPRIQELATKERVDPGHCKRVKDFVVGRHGYGSIKFLGETDVCKLDLEMVVQ
FKNREVNVYMDESKKPPVGQGLNKPAVVTLLNIKCMDKKTSTQVKEGARLDKYKEMLRRK
AEEQGAKFVSYDAVKGEWTFKVEHFSSYKLGEEDDM
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttcttctaatccttttggacagtcatctaacaacagtccatttgggacccaa
actcaatctttgttcgggcagaccaacaataacccgagcaataatccttttgctgtgaag
ccctttggtaattctactccttttggtgcacagacagggagttccatgtttgggggcact
tcaaccggcgtgtttggtgcacctcaaacttcttcttccccttttggtgcttcatcacaa
gcgtttggtagctctactccggcttttggagcatcttctgctcctgcatttggtagttca
acttcaccttttggtggcacttctacgtttggtcaaaagtcttttggcctctcaacgcct
cagtcaagtcctttcggaagcaccccacagcaatcacagcctgcctttgggaacagctct
tttggttcatcttcaccttttggtgcctctagcacgcctgcctttggtgcctcaaacact
tccgcatttggcgcctcaaacacttccgcatttggcgccacaagcacacctgggtttggc
gcatcaagcactcctgcctttggctccacaaacacacctgcttttggtgcatcaagtact
ccatcattcggcgcctcgagttcacctgcatttggcgcgtcacccgctccagcctttggt
agctctggcactggatttggcaacaatgccttcggtgctggaggtgcttttggtgcatca
agcactcctgcttttagtgcatcaagcactcctgcttttggtgcatcaagcactcctgca
tttggtgcgtcaagcactcctgcgtttggggcatcaagtaccccatcctttagttttagc
tcttccccagcttttggacagtctacctcagcatttggtagcagtgcctttagctctaca
caatctccctttggagcccaaggtgcacaggcttcgaccccaatatttgggggtcaaaca
actatcgggggtgaacaagggggtagtagggtcatgccttatgcacctacaaatgaggca
gagtcaggcactggtaaccctgggaggctacaatctatatctgccatgcctgtatacaaa
gaaaaaaaccaggaggagcttcggtgggaggactaccagcgaggagataaaggtggacaa
cgtcctgctggtcaatctcctggaggtgctggattcggtgtaacaacttctcagccaagt
gtattctctccttcaccaacgtttggccagacatctccaaatccaacaaacccttttgca
cagaagacatcaataactaccccaaatctttcatctccctttggtcaacccactaccccc
tcctttggtcaacccacaaccccatcctttggtcaacccacaaccccatcctttggtcaa
cccactatcccatccatgtttgggtcaactgcatcaaatgccacatccgtttttggatca
tcccctagttttgcaacaaacacacagcagccatttggttcagcccctgcacatgggtca
aattcagcatttagcatgggtggaaataataacaacagtcagtcatctcccctgttcggt
tcaaaccccttatttggacagagtactactcctgcatttcaacagacgagttctgcgttt
ggactgaataccactcctacatttcaacagactagttctgtgaatggacagaataccaat
cctgcaaatggacagagtaacattttcagtacaccttccactggctccgcaaatctgttt
tcaagctctttcactacaagcatctctccctttggtcaaacaacgcctgctctttcgaca
ccttaccaatcagtccagccaactcaaccatcaggtgcttttagtttcaacaactttgct
caaacccaaacagctaatacaactggcgttacaggtggaacgggaactttgagccaaagc
aactttaagcaagtgcctgcgttcggtaactctgctattatgcaaccaactcctgttaca
aacccatttggaacgcttcctgctttgcctcaggtttcaattggtcaaggtagaaattca
ccttccattcagtatggaatctccagcatgcctgtcgttgataagcctgctcctgttaga
gtatctccactcctgacttctcgacaccttttacaaaggcgggtcaggctacctacaagg
aagtaccgtcctggtgatgatggtccaaaggttccattcttcagcgatgaagagaattcc
agtacaccaaaggctgatgcccttttcattccaagggaaaaccctagagctttatttata
cgcccagttgaaagggtaaaatcagaacatcgaaaggatggcccggccccactgcaggag
aatggtaataagtcaaatggggttactaatggagccaaccatgagaataagaataacggt
gaaacttgtgaggctcctccggttaaagccaatcagaaaccgaacggaacacatgaaaat
cacggaggcgacaaaaatggttcaccaagcggagcagatatcgagacattgatgccaaag
ctgcatcacgctgaatatttcacagagcctcggatccaagaactggctacaaaagaaagg
gttgatccgggtcattgcaagcgggtaaaagactttgttgttggtagacacggttacggg
agtataaaatttctgggagagacggatgtgtgtaaacttgacctggaaatggtggttcag
ttcaaaaaccgtgaagtgaatgtgtacatggacgagagcaaaaaacctcctgtgggtcaa
ggactgaataagcccgcggttgtaactttgctgaacataaaatgtatggacaagaagacc
agtacgcaagtgaaggaaggcgcgagattggacaagtacaaggaaatgctgaggaggaaa
gctgaggaacagggagcaaaatttgtgtcttatgatgctgtgaaaggcgagtggacgttc
aaggtggagcatttcagttcctacaagcttggagaagaagatgatatgtag
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