Camelina sativa (false flax): 104700913
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Entry
104700913 CDS
T05044
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat04120
Ubiquitin mediated proteolysis
csat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104700913
04120 Ubiquitin mediated proteolysis
104700913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104700913
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104700913
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104700913
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Other DBs
NCBI-GeneID:
104700913
NCBI-ProteinID:
XP_010414817
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Position
7:10935059..10937054
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AA seq
283 aa
AA seq
DB search
MIQLKVYAGVSTLASLAVIYHAFSTRGQFYPAAVYLSTSKINLVVLLNMGLVLMFSLWNL
VKIVFLGSLREAEVERLNEQAWRELMEILFAVTIFRQDFSVGFISLVVTLLLIKGLHWMA
QKRVEYIETTPSVTLLSHVRIVSFMVFLLLLDGLLTYTSMRQLIQSRKASMSVFFTFEYM
ILATTTLSIIVKYAFYVTDMLKEGQWEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNYG
LPLHLIRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPE
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgattcagctaaaggtttacgcaggagttagtaccctcgcgtcattggccgtgatttac
catgctttcagtaccagaggtcaattttaccccgcggctgtgtatctatcgacgtccaag
atcaatttggtggttcttttgaacatgggtttggttctaatgttcagtttatggaatctt
gtcaaaattgtgtttctgggttctcttagagaagctgaggttgagcgtttgaatgagcaa
gcgtggagagaactcatggagattctctttgctgtcactatttttcgacaggacttctct
gttggttttatctctttggttgtgactcttttgttgatcaagggtttgcattggatggct
cagaagagagtcgagtatattgagactactccttctgttactttactctctcatgttcgt
attgtttccttcatggtgtttcttctgcttttagatggcctccttacgtatacttctatg
cggcaattgattcagtcccggaaagcttctatgtctgtcttcttcacgtttgagtatatg
attcttgcaacaacaactctttctattattgtaaagtatgccttctatgtcacggatatg
ctcaaggaaggtcaatgggaaggaaaaccagtatatactttctatctggagctcgtccgt
gacttgcttcacttgtccatgtatctctgcttcttcctcatgatattcatgaactatggc
cttcctttgcatctaataagagagctctacgaaacgttcagaaacttcaagattcgtgtg
actgattacctccgatatcgtaaaatcacttccaatatgaatgatcggtttcctgatgca
actcctgaa
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