KEGG   Camelina sativa (false flax): 104701095
Entry
104701095         CDS       T05044                                 
Name
(RefSeq) exosome complex component RRP4 homolog
  KO
K03679  exosome complex component RRP4
Organism
csat  Camelina sativa (false flax)
Pathway
csat03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104701095
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104701095
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     104701095
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     104701095
SSDB
Motif
Pfam: S1_RRP4 KH_6 ECR1_N RRP40_S1
Other DBs
NCBI-GeneID: 104701095
NCBI-ProteinID: XP_010415031
UniProt: A0ABM0SRE0
LinkDB
Position
7:13338822..13340193
AA seq 301 aa
MRKLQVELPLNQTQKVRFERSIERLQLLSSTTNNSVIVADSINEDAYLLKGHGTSEVDGE
LLATVCGVVVHVDKLVYVRNLRAKYKPEVNDVVVGRVIEDFEVSQSYWRVELNSTQYGVL
KLSSTNMPDAVQKRKRFVDELNMRDIIVEDDVVCWAVIHRDGRLELKALSHKYGKLDNGE
LLKVDPYLVKKTMSHFHYLESLGIDLILGRNGFIWIGEHSQVKDPNQNIGKEKSYTPLET
RQSILRIGNAIRVLSNLGFTMTLEVVMETVNLSNTENIDVHDMLGSEFHVLVTENEAERR
R
NT seq 906 nt   +upstreamnt  +downstreamnt
atgagaaagcttcaggtagagctaccattgaaccagacgcagaaggtccggtttgagaga
tctatcgagcggctacaattgttgtcgtcaaccacaaacaactctgtaatcgttgccgac
tctatcaacgaagatgcatacctccttaagggacatggaacctccgaggtagatggtgag
ttgctagcgacggtctgtggagttgtggttcatgtggacaagcttgtatatgtacgcaac
ttgcgagccaagtacaaacctgaggttaacgatgtagtggtaggacgtgtgattgaggac
tttgaggtctctcaaagctattggagagtggagctaaactctactcaatatggagtacta
aagctttcttccacgaatatgcctgatgctgttcagaagcgaaaaaggtttgtggatgaa
ctcaatatgcgtgatattattgtagaagatgatgtcgtttgttgggctgtaattcaccgt
gatggtagattggagctaaaagcgttaagtcacaagtatggcaagctcgacaacggagag
ctactcaaggttgatccttacttggttaagaaaaccatgagtcactttcattacttagaa
agtcttgggatcgatttgattctcggccgcaacggcttcatttggatcggcgaacactcc
caagtcaaagatcctaaccagaacataggaaaagagaaaagctatacgccactcgagact
cgacaaagcattctcagaattgggaatgcgatacgggtcttgtctaatcttggcttcacc
atgactctagaagtggttatggaaactgttaacttaagcaacacggagaatattgacgta
catgacatgcttggatcagagttccacgttttggtcacagagaacgaagctgaaagaaga
agatga

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