Camelina sativa (false flax): 104701861
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Entry
104701861 CDS
T05044
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104701861
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104701861
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104701861
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-rbx1
MFS_2
Motif
Other DBs
NCBI-GeneID:
104701861
NCBI-ProteinID:
XP_010415919
UniProt:
A0ABM0STI6
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All DBs
Position
7:21628088..21630599
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AA seq
453 aa
AA seq
DB search
MMNRALVLLLLLHVFTVSCLASAKVILIRNNLTLSFDDIEANFAPSVKGTGEIGVVYVAE
PLDACQNLMNKPEQGSSNETLPFVLIVRGGCSFEEKVRKAQRAGFKAAIIYNSEDHGTLI
AMAGNSGGIKIHAVFVTKETGEALKESAGFPDTKVWLIPSFENSAWSIMAVSFISLLAMS
AVLATCFFVRRHRIRRRTTSRSSRVREFHGMSRRLVKAMPTLVFSSFHEDNTTAFTCAIC
LEDYTVGDKLRLLPCCHKFHAACVDSWLTSWRTFCPVCKRDARTSTGEAPASESTPLLSS
AGSSFNSSSLHSSVRSSALLIGPSMGSLPSFSPAYASSSYIRQSFQSYSNRRSPPISVSR
SSVDLRQQGASPSPSPSPSPSPSYISHMASPQSLGYPTISPFNTRYMSPYRPSPSNASPA
LPGSSNYQFHPLRYSESAGTFSPYASANSLPDC
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcgtgctttggtcctactgctacttttacacgttttcactgtttcttgttta
gcttcagccaaagttattctcatcaggaacaacctcactctctctttcgatgacatcgaa
gctaattttgctccgtcagtgaagggtacaggtgaaattggagtggtttatgtagctgag
cctcttgatgcttgtcagaatctgatgaataaaccagagcagggtagctctaatgaaacc
cttccttttgtgttgattgtaagaggaggttgtagttttgaagagaaagtgagaaaagct
cagagagctggttttaaagctgctattatctataacagtgaagaccatggaaccttgatt
gcaatggcaggtaactcgggtggtataaagattcatgcggtcttcgtcactaaagaaacg
ggagaagccttgaaggagtctgctggtttccccgatacaaaagtttggttgattccaagt
tttgagaactctgcgtggtcgatcatggcggtttcattcatttcgttgctagcaatgtct
gctgttctcgctacttgtttctttgtccgtaggcatcgtattagaaggcggacaacatct
cggtcttctcgagtccgtgagttccacgggatgagccgccgcttggttaaagcaatgccg
actcttgtattcagttctttccacgaagacaacactactgcattcacttgtgctatttgc
ctcgaagactacactgttggagacaagcttaggctcttaccttgctgccacaagtttcat
gctgcgtgtgttgactcatggttaacctcttggagaacgttctgtccagtatgcaaacga
gatgcaagaacgagcacaggcgaggctccagcttcagagagcacgccattgctctcatcc
gctggatcgtctttcaactcttcctctctacactcttccgtcagatcatccgcgctattg
atcggtccttcgatgggctcattaccttctttctctcccgcatacgcgagctcatcatat
atcagacaatctttccagtcttactctaaccgtagatctcctccaataagcgtaagtcgt
agctctgtggatctcaggcaacaaggagcttctccatcaccatcaccatcaccatcacca
tcaccatcatacatttcccatatggcttctccacagtcactgggatacccgactatctcc
cctttcaacacgaggtacatgtcaccgtacaggcctagtccgagcaatgcgtcacctgca
ttgcctggatcatcgaattatcagttccatccactacgttacagtgaatcagccggaact
ttctctccatacgcctctgcaaactcgcttcccgactgttaa
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