Camelina sativa (false flax): 104702098
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Entry
104702098 CDS
T05044
Name
(RefSeq) transcription initiation factor TFIID subunit 2-like
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
csat
Camelina sativa (false flax)
Pathway
csat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104702098
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csat01002
]
104702098
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104702098
03036 Chromosome and associated proteins [BR:
csat03036
]
104702098
Peptidases and inhibitors [BR:
csat01002
]
Metallo peptidases
Family M1
104702098
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104702098
Coactivators
SAGA/TFTC/STAGA complex
104702098
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
104702098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
Peptidase_M1_N
HEAT_2
PT
Motif
Other DBs
NCBI-GeneID:
104702098
NCBI-ProteinID:
XP_010416225
LinkDB
All DBs
Position
7:complement(23063097..23072851)
Genome browser
AA seq
1400 aa
AA seq
DB search
MAKAKKPKNEEAPGAKTTSENTGAKVLHQKLFLSIDFKKRQIYGHTELEVSVPDIGIVGL
HAENLGIESVLVDGEPTVFEYYPHHQNSETESNWNSVSDPASAADAAAMEYVGVLKREDT
ANLLINCCKPSKDLSEQLDNVTLENGSQSSGEAKQNVKLIRINYWVEKIESGIHFDENIV
HTDNQMRRARCWFPCIDDEYHRCSFDLEFTVPHNFVAVSVGKLLYQVMCKEDTSRKTYVY
ELAIPIAPRWVSLVAGPLELLPDQNNFLISNLCLPYDISRLRNTMEFFHEAYSYYEDYLS
ANFPFGFYKQVFLPPEMVVSSSTLGASFSIFSSHMLYDERVIDQTIDTRIKLASALAKQW
FGVYITPESPNDDWLLDGLAGFLTDMFIKQFLGNNEARYRRYKANCAVCKADDSGAMCLS
ASPSCKDLFGTHSIGMHGKIRSWKSGAVLQMLEKQMGSDSFRKILQKIISRAKDPSNPIR
SLSTKEFRQFANKIGNLERPFLKEFFQRWVASCGCPMLRIGLSYNKRKNIVEMAALRECT
ASLDARLSVIGATSDSENRDVDVGWPGIMSIRVYEIDGMSDHPKLPMAGDRWQLLELPCH
SKLAAKRYQKPKKGGKPDGAEDNADAIVPLENKASIESPLTWIKADPEMEYIAEIQLHQP
LQMWVNQLEKDGDVVAQAQAIASLEALKQHSFSIVNALNSILTDSKVFWRIRIGAAFAMA
KTASEETDWAGLQHLIKFYKSRRFDAEIGLPKPNDFRDFPEYFVLEAIPHAIARVRGAEG
KSPREAVEFILQLLKYNDNSGNPYSDVFWLAVLVQSVGDLEFCQQTLTFLAPLLKRIDRL
LQFDRLMPSYNGILTISCIRTLAQTALKLSDSISFEHICKLIEPFRNSDTILQVRVEASR
ALLDIEYQSKGISSALLLFKKYVVEESSLRGQVKLCVHTMRLCQIAVGYDSDDCVDTVSL
LDLLHLFKSHVVFNNEFLRHYLFCIFQILAGRPPTLFGVPKEKPLQLVDVEACIEPKNVF
SVPEAEAGGPSLLALGDAKGKSLDVVPFGVPARSQEMFMPIVSELRFPEPVAAYEAQHLE
PHMESQNQPLLENPIVNEIPLDGEAPREELANRDVNPNPPIMERQKEPDVASVSVSHEVK
KSVIRIKVRPSGATSRAEGSARSIERSQGIVVRHDIDRGQTSSASVDAPQRISTDAVSIS
NQNHVEEVNSCHDVGSRMTASIGSVKFVSEGDTFGKELQCTAESGKTSASQKADNNIQIA
APSFIPVDHSMENEAQQKYASLQTLSVSKERDKKKDKEKKEKKRKREDPVYQEKKRLKKE
KKRKEKEMAKLVSSTSDPAREKQIESVVAEAKKVEEPSNGAELVKVETEAEPSAEPSAEP
SDRPIPKFRIKLKSKAFNNS
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggctaagaagccgaagaacgaggaagctcctggcgcgaagacgacctcggag
aacactggagctaaagttcttcaccagaagctctttctttctatcgactttaaaaaacgc
caaatctacggtcatacagagttagaagtaagtgtgccagatattggtatcgtgggacta
cacgcggagaatttgggaattgagagtgttttggtagatggggaacccactgtgtttgag
tactatccgcatcatcaaaactctgaaactgagagtaactggaactcggtctctgaccct
gcgtcagcagctgatgctgcggctatggaatatgtcggggttcttaagagagaagacaca
gcaaatttactgattaactgttgcaagccctctaaggatttatctgaacagctagataat
gttactttagaaaatggttcccaatcctccggggaggcaaaacagaatgttaaactgatt
cggattaactactgggtagagaaaatagagtcaggaattcattttgatgagaacattgta
cataccgataaccaaatgagacgagcccgctgttggtttccttgtatagatgatgagtac
catcgttgcagtttcgatctggaattcactgttccacacaactttgtggctgtcagtgtt
ggaaaattactttaccaggttatgtgcaaagaagatactagccgaaaaacttatgtatac
gaattagctattcctatcgctccacggtgggtgtctttagttgcgggaccattggaactc
cttccagatcaaaacaactttctcatatctaacttgtgtttgccgtatgatatctcgaga
cttcgtaatacaatggaatttttccatgaagcttatagctactatgaggattatttaagc
gcgaactttccatttggattctacaagcaagtctttttacctcctgaaatggttgtttcc
tcgtcgactttgggagcttctttcagtatctttagctcccacatgctatatgatgagagg
gttattgatcagacaatagatacgcgtattaaacttgcttctgcgttagcaaaacagtgg
tttggagtttatattactcccgagtcaccaaatgatgattggctcctcgacggtcttgct
ggtttcttgacggatatgtttatcaagcagtttttgggaaataatgaagcacgataccgg
agatacaaggcaaactgtgctgtatgtaaagctgatgatagtggtgcaatgtgcttgagc
gcatctccttcttgcaaggacctatttggaactcattctattgggatgcatgggaagata
cgatcatggaaatcaggagcagtccttcagatgttggagaagcaaatgggctcagactcg
tttcgtaaaattttgcagaaaattatatctcgagccaaagatccatctaatcctatacgg
tcccttagcacgaaggagttccggcaatttgctaataagattggaaatcttgagcgtcca
tttcttaaagaattttttcagcgatgggttgcatcttgcggttgtcctatgctaaggatt
gggttgtcttacaacaaaaggaaaaacattgttgaaatggctgctctgcgcgaatgcaca
gcttcgctcgatgcaaggttatcagttattggggctacttctgattcagaaaaccgagat
gtggatgttggctggccgggtattatgagtataagggtttacgagatcgatggaatgtcc
gatcatccaaagttgcctatggctggagatagatggcagctactggaattaccatgtcat
tctaaacttgctgctaaacgctatcaaaaaccaaagaagggaggaaaacctgatggggct
gaagacaatgctgatgctatagtaccgttagaaaataaagcaagcattgaatctcctttg
acttggattaaagctgaccctgagatggaatatattgctgagattcaacttcatcagccc
ctacaaatgtgggtgaatcaactagagaaggatggagatgttgttgctcaggcacaggca
attgcgtcacttgaagctttaaaacaacactcattttccattgtgaatgcgctcaatagt
attctcactgactccaaggttttctggagaatacgcattggcgcagcgtttgcaatggct
aaaacagcatcagaggagactgactgggcgggtttgcaacatctaataaagttttataaa
agtagaagatttgatgcagagattggactccccaagccgaatgacttccgtgatttccca
gaatattttgtgcttgaggccattccacatgccattgcaagagttaggggagctgagggg
aaaagccctcgagaagctgttgaatttatattacagcttctaaagtacaatgacaacagt
gggaatccgtattctgatgtattctggcttgctgtgcttgttcagtcagttggtgatctc
gaattctgtcaacagactttaacgtttttagcccctcttctgaagcgcattgacagactc
ttgcagtttgacaggttgatgccgagctacaatggcatcttgacaattagctgcatcaga
acgttggcacagactgctctcaagctttctgattccatcagtttcgaacacatctgtaaa
cttatcgaaccattccgaaactcggatacaatattgcaagttcgtgtagaagcaagtagg
gcacttcttgacatcgagtaccaatccaaagggataagttctgctctattgttgtttaaa
aaatatgtggtagaagaatcatctttgagagggcaagttaaattgtgtgtacatacgatg
cggttatgtcaaatagcagttggatatgactccgacgattgcgtcgacactgttagtctt
cttgatttgctgcatctgttcaagagccatgtagtattcaacaatgaatttcttcgccac
tacttattctgcattttccaaatcctcgctggaagacccccaacgttgtttggagtgccc
aaagagaaacctttgcagcttgttgatgtggaggcttgcattgagccgaagaatgtattc
tcggtcccggaagcagaagcaggggggccttcacttttggcgcttggagatgccaaagga
aaatcgctggatgttgttccttttggcgttccagcgagatcacaggaaatgttcatgcct
attgtttctgaactgaggtttccagaacctgtcgctgcgtatgaggctcagcatcttgaa
cctcacatggaaagtcaaaaccaacctttacttgaaaatcccattgttaatgagattcca
ctggatggcgaagcccccagagaagaattagctaatagggacgtaaacccaaaccctccg
ataatggaacgtcaaaaagaacctgatgtggcgtctgtgtctgttagtcacgaggtcaag
aagtctgttatacggatcaaagtcagaccatctggtgcgaccagcagagccgagggatca
gcacgatccatagaaagatctcaagggattgtggtacgccatgatatagacaggggacaa
actagttcagcttcagtggacgctccacagagaatctcaacggatgctgtgagcataagc
aatcagaatcacgtggaggaagtaaattcgtgtcacgatgttggatctcgcatgaccgca
agtatcggcagtgtaaaatttgtaagcgaaggcgatacatttgggaaagagttgcaatgc
actgctgagtctgggaaaacttcggcaagccagaaagcagataataacatccagatcgca
gcgcctagcttcataccagtagatcatagtatggaaaacgaggcgcagcagaaatacgcg
agccttcaaacactatctgttagtaaagaaagggataagaagaaagacaaggaaaagaaa
gagaagaagaggaaaagagaagacccggtttaccaagaaaagaaacggttaaagaaggag
aagaaacggaaggaaaaagaaatggcaaagcttgtgagcagcacttcggatccagctagg
gagaagcagatagagagtgtcgtcgcggaggctaaaaaagtagaagagccaagcaatggt
gccgaattggtaaaggttgaaacagaggctgagccatcagctgagccatcagctgagcca
tcagatcgtccgattcctaagttccgaatcaagctgaaaagcaaagcgttcaacaactcg
taa
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