Camelina sativa (false flax): 104702493
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Entry
104702493 CDS
T05044
Name
(RefSeq) SNW/SKI-interacting protein-like isoform X1
KO
K06063
SNW domain-containing protein 1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104702493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104702493
Spliceosome [BR:
csat03041
]
Complex B
Other components
Prp19-related factors
104702493
Complex C
104702493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Ribosomal_S8
Motif
Other DBs
NCBI-GeneID:
104702493
NCBI-ProteinID:
XP_010416646
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Position
7:complement(25247994..25253820)
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AA seq
611 aa
AA seq
DB search
MTPLKDLLPDPKSTTTTHYDHSNDPWFKNRFVENEAEKSATITFKVVPVYLKRQGFRPKN
PEDFGDGGAFPEIHLAQYPLGMGRNKSNKPGGKTLPVTVDAQGNVVFDAIVRQNENSKKI
VYSQHKDIIPKILKDEGYLDTVLDEEEELQKEIQETAEETKAAIEKIVNVRLSAAQPSNV
ARQSGESKYIKYKPSQQSAAFNSGAKERIIRMVEMPVDPLDPPKFKHKRVPKASGSPPVP
VMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDNFAKLS
EALYVAEQKAREAVSMRSKVQKEMSMKEKERKEQELRALAQKARSERTGAAVSMPVSSDR
GRSESVDPRGDYDNYDREREREREREGPKETREEREERIQREKIREERRRERERERRLEA
KDAAMGKKSKITRDRDRDISEKVALGMASTGVKGGEVMYDQRLFNQDKGMDSGFAADDQY
NLYDKGLFTAQPTLSTLYKPKKDNDEEMYGNADVQLDKIKNTERFKPDKAFTGASERAGT
KRDRPVEFEKEEEQDPFGLDRWVSDLKKGKKPLDKIGSGGTMRASGGGGSSSRDDHGGSG
RTKINFERSGR
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctcttaaagaccttttacctgaccccaaatcaaccactaccacgcattatgat
cattctaatgatccatggttcaaaaaccgtttcgttgaaaacgaggccgagaagtccgca
accatcacctttaaagtggtgcctgtttacctgaaacgtcaaggtttccgtcccaagaac
cctgaggattttggtgatggtggtgctttccctgagattcatcttgctcagtatcctctt
ggtatgggtaggaataaatccaataagcctggaggcaagactctccctgttactgtcgat
gctcagggtaacgttgtctttgacgctattgtgaggcagaatgagaactccaaaaagatt
gtttattctcagcataaggatattattccgaagattcttaaagacgagggatacttggat
actgttttggatgaagaggaggaattgcagaaggagatacaggagactgctgaggaaaca
aaagctgccattgagaagattgtgaatgtgagactcagtgcagcgcagcctagtaatgtg
gcaaggcaatcgggtgagtcgaagtacatcaagtataagccttcccagcaatctgcagcc
ttcaattccggtgctaaagagaggattattaggatggtggagatgcctgtagatccactt
gatccaccaaagtttaagcataagagagtcccaaaggcttctggctctccgcctgttccg
gtcatgcattcaccgcccaggcctgttactgtcaaggaccaacaagactggaaaatccct
ccttgcatctcaaattggaagaatccaaaaggttacacaatccctcttgataaacgtcta
gctgctgatggaagaggcctacaggacgttcagatcaatgataactttgccaagttatca
gaggcgctctatgtagctgagcagaaagctagagaggctgtttcaatgcgttcaaaggtg
caaaaagagatgtcaatgaaggagaaggaaaggaaagagcaggaattgagggctcttgcc
caaaaagctcgctctgaaagaacaggtgctgctgtgagtatgcctgtttcatctgacagg
ggtaggagtgaaagtgttgacccaaggggtgattatgacaactatgaccgggagagagaa
agggaaagagagagggaaggaccaaaagagactagagaggaaagggaggaacggattcag
agagagaagatccgagaagagcgtcgtagggaaagagagagggagagaaggttggaagct
aaagatgctgccatggggaagaagagcaagatcacaagggatagagaccgtgatatcagt
gagaaagttgctcttggaatggcatctactggagtgaaaggcggggaagttatgtatgat
caacggctgtttaaccaggacaaaggaatggactctggattcgctgctgatgaccagtac
aatttatatgacaaaggcttgttcactgcacaacccactctttcaacgctgtacaagcca
aagaaggataacgatgaagaaatgtatggaaacgcagatgtacagctcgacaagatcaag
aacactgagaggtttaaacctgacaaagctttcaccggggcttccgagagggctggtacc
aagagagaccgacctgttgagtttgagaaggaagaggaacaagatcctttcggtctagac
aggtgggtttctgatttgaagaaaggtaagaagcctttggacaaaatcgggtctggagga
actatgagagcaagtggcggcggtggtagctcgtcaagggatgaccatggcggatctggt
cgaaccaagatcaatttcgaacgcagtggccgttga
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