Entry |
|
Name |
(RefSeq) DNA topoisomerase 2-binding protein 1-like isoform X2
|
KO |
K10728 | topoisomerase (DNA) II binding protein 1 |
|
Organism |
csat Camelina sativa (false flax)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:csat00001]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104702509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:csat03032]
104702509
03400 DNA repair and recombination proteins [BR:csat03400]
104702509
DNA replication proteins [BR:csat03032]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
104702509
DNA repair and recombination proteins [BR:csat03400]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
104702509
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
7:25331249..25337894
|
AA seq |
1086 aa
MKTTQLFKGSNVFMSRNLVPPEVFDTLLDAFKLNGAEIFLCCDPSRSGPSDFHVIASPDH
EKFKDLKAKGCNLIGPQCALSCAKEGRPLPQGGFTCCLAMDGLKVLASGFLMDEKVKIRE
LVTSMGGVFLSKSSSDVNFVIVKNVLAAKYKWALNTQKKPVVTLNWLHQCWTEHRVVPQE
PYKVPPFSGLTICVTRIPGDERKGMEKVISEYGGSYSGELTRSCTHLIADAAEGDKYKVA
RKWGHIQIVTRKWFQQSIDRKVCLSEESYPVLSSIPLARGLRDKGIHHNVQEKFPLAAAV
SVSVADSYASCAQSRDSDIEASASQNVFSTSMNPSTDVKEPSEGPHTRPQEQDIDGCTAR
DSESEDNDLYLSDCRIFLLGFEASEMRRLFKLVCRGGGSRYMLLDERMTHIVVGTPSESE
KREVRSIAASGVVQVVTPSWLEDCDRERKEIPVHKLYTADHLILPRDSACLTKGSFAGMS
SMEQGKNTLGQTMAYDSSSRSINVSNGPATFLGNKEAMQEFGRKDKIHAERKIVSPKQKE
TRISPVTSKSIDQQSNQYEFNGQNVNERMSSVFKGKTFCFSHSFPEDRRPEIVEWVNQGG
GEVVVNDPMINNADFTIESHGGFRSAGTTHISYVSSHWVRSCLEDGCLAAVSSHIVYSPL
PCQTPLPGFESFCICSSQHDDKDIKLLSNLCYVLGARFLKKLTRKVTHLLCNYANGSKYE
TASKWGIVSVTPDWVYECVRQNQVVSPDNFHPKELTTQDREAGSGASQFHTHFLPMSSRD
NVSLLVSHSEEREYIQDFSGKNGKGEVNYRLGEAGRKQTFPSKKAKLFKDGQESHVPLLV
SHSEEREYIQDFSGKNGKGEVNYRLGEAGREQTFPSKKAKLFKDGQESHVPLLVSHSEER
EYIQDFSGKNGKGEVNNRLGEAGREQTFPSKKAKLFKDSQESHVFPVGEPPRYCDRPSKS
GEGNVSGNDAASSREVPDVADAIEDLSEQTSKIQHQKSPGRISEETLFSTSEQYNTGNHS
VTGLSRHWINRVNKNDDMGSPPRNVTTGTYGNFSETQTESQVVSYEEDLSGRQMLIDRVR
TRNSLT |
NT seq |
3261 nt +upstreamnt +downstreamnt
atgaagacgacgcaactatttaaaggttccaacgtctttatgtctcggaatctggttcct
cctgaagtcttcgatacacttctcgatgctttcaagctcaacggtgccgaaatcttcctc
tgctgcgacccctctcggagcggtccctccgattttcatgtcatcgcttctcccgatcat
gagaaattcaaggatcttaaagccaagggttgtaacttgattggtccacagtgtgccctc
tcctgtgcaaaagagggtagaccgctgccacaagggggattcacttgttgcctagcgatg
gatggtcttaaagttcttgcttctggttttctgatggatgagaaggtcaagataagagag
ttggttacttccatggggggagtttttctttccaaatcttcttctgatgtcaacttcgtc
attgtcaaaaatgtcttggctgctaagtacaagtgggctctgaatactcagaagaagcca
gttgttacactgaattggttacatcagtgttggactgagcaccgtgtggttccccaggaa
ccatataaggttcctcctttttctggattgacaatctgtgtcacaagaattccaggagac
gagcgtaagggaatggagaaggttatttcagaatatggagggagctactctggtgagcta
acaaggagttgtacacatctgatcgctgatgctgccgaaggtgacaaatacaaagttgct
cgaaaatggggtcacattcaaattgtcacacggaaatggtttcagcagtccatcgataga
aaagtctgtctcagtgaagagtcatatcctgttctcagttccatacccttggcacgaggg
ttgcgtgataaaggaatccatcataatgttcaagaaaagtttcctttggccgcagctgtg
tctgtgtctgtggcagattcatatgcttcttgtgctcagtctagagactcggatatagaa
gcttctgcctcacaaaatgttttttccacttctatgaaccccagtaccgatgttaaagaa
ccaagtgaaggcccacatacaaggccgcaagagcaagatattgatggttgtactgccaga
gattcagaatccgaagacaatgacctgtacttatcagattgtagaatttttctgcttggt
tttgaagcttctgaaatgcgtagactttttaagttggtctgtagaggtggtggatcccgg
tatatgctgctagacgaaagaatgactcatattgttgttggaactccttcagagagtgag
aaaagagaggtgaggagtattgcagcttctggtgtcgttcaagtagtcacacccagttgg
cttgaagattgtgatcgtgagagaaaagaaattccagttcataaattatatactgctgac
cacttgattcttccaagagattctgcatgcttgaccaagggatcatttgcagggatgtca
agtatggaacagggtaaaaatacactcggtcagaccatggcatatgattcatcttcaagg
agtatcaatgtttcaaatgggccagcaacttttctgggaaacaaagaagcaatgcaggaa
tttggcaggaaagataagattcatgcggaaaggaaaatagtatcacctaagcaaaaagaa
acacgtatttcccctgtaactagtaaaagcatagaccaacagagtaatcaatatgaattc
aatggtcaaaacgtgaatgaaagaatgtcatctgtatttaaggggaagacattttgtttc
tcgcattcttttcctgaagatcggcgacctgaaatcgtggaatgggtgaatcaaggtgga
ggagaagtggtggtaaatgatcctatgataaataacgcagattttactattgaatcccat
ggtgggttccgaagtgccgggactacccatattagctatgtctcaagtcattgggttcga
tcttgtttagaggatggttgtttagctgctgttagtagtcatatcgtctactcacctctt
ccctgccagacacctttgcctggattcgaaagcttttgcatttgtagttcccaacatgac
gacaaggatataaaactcctgtcaaatttgtgttatgtacttggagcaagatttttgaaa
aaactaaccaggaaagtgactcacttgctatgcaactatgctaacggaagtaagtatgag
acagcttccaaatggggaatagtttccgtgacacctgactgggtttatgaatgtgttaga
cagaatcaagttgttagtccagacaacttccatccaaaggaattgacaactcaagacaga
gaagcaggttctggcgcaagtcaattccatacacattttttgccaatgtcctcaagggac
aatgtgtctctacttgtaagccactctgaagaaagggaatatattcaagatttttctggc
aaaaacggtaaaggtgaagtaaattacagacttggagaagctggaaggaaacagactttt
ccgtctaagaaggcaaaacttttcaaagatggtcaagaaagtcatgtgcctctacttgta
agccactctgaagagagggaatatattcaagatttttctggcaaaaacggtaaaggtgaa
gtaaattacagacttggagaagctggaagggaacagacttttccgtctaagaaggcaaaa
ctattcaaagatggtcaagaaagtcatgtgcctctacttgtaagccactctgaagagagg
gaatatattcaagatttttctggcaaaaacggtaaaggtgaagtaaataacagacttgga
gaagctggaagggaacagacttttccgtctaagaaggcaaaacttttcaaagatagtcaa
gaaagtcatgtgtttcctgtgggagagcctccaagatattgtgatcgcccttcgaagtcc
ggagaaggcaatgtctctggaaatgatgcagcaagtagtcgtgaagttccagatgtggct
gatgctattgaggatctgtcggagcagacaagcaaaattcaacatcagaagtctcctggg
aggatttcagaagagactcttttttcaactagtgaacaatacaataccggaaatcactct
gtcactgggctgtctagacactggataaacagggtaaataagaatgacgacatgggcagt
cctccacgaaatgtaactacaggcacttacggaaactttagtgagacgcagacagaatcg
caggttgttagttacgaggaagatctttcaggaaggcagatgcttatagacagagttaga
acacgaaatagcttaacgtaa |