KEGG   Camelina sativa (false flax): 104702530
Entry
104702530         CDS       T05044                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
csat  Camelina sativa (false flax)
Pathway
csat03030  DNA replication
csat03410  Base excision repair
csat03420  Nucleotide excision repair
csat03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104702530
   03410 Base excision repair
    104702530
   03420 Nucleotide excision repair
    104702530
   03430 Mismatch repair
    104702530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csat03032]
    104702530
   03036 Chromosome and associated proteins [BR:csat03036]
    104702530
   03400 DNA repair and recombination proteins [BR:csat03400]
    104702530
DNA replication proteins [BR:csat03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    104702530
  DNA Replication Termination Factors
   ELG1-RFC complex
    104702530
Chromosome and associated proteins [BR:csat03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    104702530
DNA repair and recombination proteins [BR:csat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     104702530
  Check point factors
   HRAD17(Rad24)-RFC complex
    104702530
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_assoc_2 AAA_22 AAA_11 AAA_16 AAA_14 ATPase_2 DNAX_ATPase_lid AAA_5 AAA_24 RuvB_N DUF815 ResIII AAA_30 AAA_7 AAA_19 AAA_3 bpMoxR nSTAND3 MCM AAA_28 ABC_tran AAA_18 Mg_chelatase
Other DBs
NCBI-GeneID: 104702530
NCBI-ProteinID: XP_010416690
LinkDB
Position
7:complement(25423227..25425890)
AA seq 383 aa
MTEITSAMDIDVDENQPRKPVNKGKDVAGFGGGPPQGKATPWVEKYRPQSLDDVAAHRDI
IDTIDRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGPKYRSMILELNASDDRGIDVV
RQQIQDFASTQSFSLGKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALIGNHVN
KIIPALQSRCTRFRFAPLDPVHVSQRLKHVVDAEGLNVSEDGLAALVRLSNGDMRKALNI
LQSTHMASKQTTEEKRKALDTVQSTDTKSEQITAEEVYLCTGNPLPKDIEHIAGWLLNKP
FAESYKNISEMKTRKGLAIVDIVREVTMFVFKIQMPSDVRVQLINDLADIEYRLSFGCND
KLQLGAIISTFTHARSAMVGAAK
NT seq 1152 nt   +upstreamnt  +downstreamnt
atgactgagataacgtcggcgatggacattgacgtagacgaaaatcagcctcgcaagccg
gttaacaagggaaaagacgtcgccggttttggtggtggtccgccgcagggtaaggcgacg
ccttgggttgagaagtaccgacctcagtcgctcgatgacgtcgctgcacatcgtgacatt
atcgatacgattgataggctgaccaatgagaacaaattgccccatcttctgttgtatggt
cctcccggtactggcaaaacatccaccattctagccgtcgcccggaaactttatggaccc
aagtaccgtagtatgattcttgaactcaacgcatctgatgatagaggtattgatgttgta
aggcagcagattcaagatttcgctagcacgcagagcttctctttaggaaaatcttctgtg
aagctggttctgctagatgaagcagatgccatgacaaaagatgctcagtttgccctgcgt
agagtaattgagaaatacaccaagagtactaggtttgcgcttattggaaaccatgtcaat
aagatcattccagctttgcagtcgagatgtactcgatttagatttgcccctctcgatcct
gttcatgtgagtcaacgtcttaaacatgtagtagacgctgaagggcttaatgtaagtgag
gatggtttggcagctcttgtacggctgagcaatggggacatgagaaaagcactgaatatt
ttgcagtcaactcatatggcgtcaaagcaaactacagaggaaaagagaaaagcattggac
actgtgcagtcaactgatacgaagtcagagcaaattactgcggaagaagtttacctctgc
accggaaacccattgcccaaggacattgagcatatagctggctggcttctaaataaacca
tttgctgagagctacaaaaacatatcagaaatgaagacgagaaaaggacttgccattgtt
gatatcgtcagagaggttaccatgtttgtttttaagatccagatgccttcagatgtcaga
gttcaactgataaacgatctggcagacattgagtacaggttgagttttgggtgcaatgac
aaactgcagcttggagctatcatttctactttcacacatgcccggtctgctatggttggt
gcagcaaaataa

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