Camelina sativa (false flax): 104702724
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Entry
104702724 CDS
T05044
Name
(RefSeq) crossover junction endonuclease EME1A-like
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03440
Homologous recombination
csat03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104702724
03460 Fanconi anemia pathway
104702724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104702724
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104702724
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Gene cluster
GFIT
Motif
Pfam:
ERCC4
EME1-MUS81_C
ATP-grasp_IQCH
Hid1
Motif
Other DBs
NCBI-GeneID:
104702724
NCBI-ProteinID:
XP_019083464
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Position
7:26397562..26401109
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AA seq
545 aa
AA seq
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MSDLILISDGEDEATPPPSKRARKNPTPTVLNLGSDPSPKKQPPGSASTTPLVLVDEAPL
FDDVKSSFASGIGVPSHRESHTFSGKRVISLESDSEDNSEPGTAKKLYVPVHAADSWKQP
CGSSDADSDDDTSWMQSAGFRSTLSKDPIEVDSDHEKEDTSDEKMGRQKRPESYKSTYLS
VDALPKKKVSKDEKISATEEKKLRKEQEKLQKAAMKAEDAEHKKLEKEKKKWEKDKALKS
IVALIDNKLIEESFGVDTGRLVSGLQEKGITYRVTSNPIERSIVWEITLPEDIAQSLPLG
SKIPYVLLVYEAEDFCNLVANKELLENVSRVRDEYPSSTICYLTNKLMSYVNKKERIEYK
DPANRSGWSKPPIDEAIAKLTTHYIGVHSRHCVDEAEVAEHVVRLTSNLAYCQVRDKLTR
WSVCAASTLMSRKGADKHLIRESLWLKVLVAIPKVPPRYALAVSKKYPSLKSLLEVYMNP
NMSVHDKEFTLKDLKVENLVGEDKKVGEACSKRIYRVLMSKDGTLKTDDVVDGAASFTPR
PYDLD
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatctcattctgatctccgacggcgaggatgaagctactccaccaccgtcgaag
agggctcgaaagaatcctactcctacggttttgaacttgggttccgatccgtcaccgaag
aaacaaccgccgggatctgcttctactactccattggtcctcgtcgacgaggcacctctc
tttgacgatgtgaagtcttcatttgcttccggaatcggagttccttcacaccgtgagtct
cacacgttttccggtaaacgagtaatatctctcgagtctgattctgaagacaattccgaa
cctggaactgcaaagaagttgtatgtacctgtgcatgctgctgattcttggaagcaacct
tgtggatccagtgatgctgattctgatgatgatactagctggatgcagagcgctggtttt
cgatctacactgtctaaagatcctattgaggtcgattctgaccatgagaaagaagataca
agcgatgagaaaatgggtcgacagaagcggcctgaaagttacaaaagtacctatctttct
gttgatgcgttgcctaaaaagaaggtgtctaaagatgaaaagatcagcgcgacagaggaa
aagaagttaagaaaagaacaagagaaattacaaaaagctgccatgaaagctgaagatgct
gagcataaaaagttggagaaggaaaagaagaaatgggaaaaggacaaagcccttaaatct
attgtcgccttgattgacaataaactgattgaagaatcttttggagttgatacaggacgt
cttgtttcggggttgcaagagaaaggcattacataccgtgtaacctctaatccaattgag
agatccattgtgtgggaaattacacttccagaggatattgctcagagtttgcccctaggg
tccaagattccatacgttttacttgtgtatgaggctgaagacttttgtaatcttgttgct
aataaagaacttctagaaaacgtctccagagttcgtgatgaatacccatcttctacaata
tgctacctcaccaataagttaatgtcctacgtaaacaaaaaggagaggattgagtacaag
gaccctgcaaatcgcagtggttggagtaagcctcctattgatgaggcaatcgcaaaatta
actactcactatattggagtacattccaggcattgtgtagatgaggctgaggtggctgaa
catgttgttcgtttaacaagtaatctggcctattgccaagtcagggataagttaactcgg
tggtcagtatgcgctgctagtacattaatgtcccggaagggagctgataagcacttgatt
agagagagcctatggttgaaagtgttggtagcaataccaaaggtaccgccaagatacgct
ttagcagtgtcaaagaaatacccatccttgaagtctcttcttgaggtttatatgaatcct
aacatgtcggttcatgacaaggagtttacactaaaagacttgaaagtggaaaatttagta
ggagaagacaaaaaggtaggtgaggcctgttcgaagcggatatacagagtgcttatgtct
aaagatggaacccttaagactgatgacgtcgtagatggtgctgcttccttcacacctcgt
ccatatgacttagactag
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