Camelina sativa (false flax): 104702767
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Entry
104702767 CDS
T05044
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
csat
Camelina sativa (false flax)
Pathway
csat03082
ATP-dependent chromatin remodeling
csat03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104702767
03083 Polycomb repressive complex
104702767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104702767
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
104702767
Histone modification proteins
HAT complexes
HATB complex
104702767
HDAC complexes
Sin3A-HDAC complex
104702767
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
104702767
PRC2.2
104702767
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
104702767
Heterochromatin formation proteins
Other heterochromatin formation proteins
104702767
Chromatin remodeling factors
NuRD complex
104702767
NuRF complex
104702767
NuRF complex (fruit fly)
104702767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
104702767
NCBI-ProteinID:
XP_010416991
UniProt:
A0ABM0SW47
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All DBs
Position
1:complement(23207117..23212695)
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AA seq
503 aa
AA seq
DB search
MESDEAAAVSPQATTPSGGTVASGPKKRGRKPKNKDDSQTPSSQQGGKMKESGKKTSQQQ
PSVDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLDQATYKNRQRLYLSEQTDGSV
PNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVA
THTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKD
KSVVLWSIQDHITTAGTASGSIVKQTGEGSDKNESPSVGPRGVYHGHEDTVEDVAFSPTS
AQEFCSVGDDSCLILWDARTGTNPVTKVAKAHDADLHCVDWNPHDDNLILTGSADNTVRL
FDRRSLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDMVSKKSG
LAAKSPAGLFFQHAGHRDKVVDFHWNASDPWTIVSVSDDCETTGGGGTLQIWRMSDLIYR
PEEEVLQELEKFKSHVMTCASKP
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgacgaagcagcagcagtgtctcctcaagcgacgacgccgagcggaggaacc
gtagcttctgggccgaagaagagaggtcggaaacctaaaaacaaggacgattctcagacg
ccgtcgtctcagcaaggtggcaaaatgaaggaaagcgggaagaaaacgtcgcagcagcag
ccgagcgtcgacgagaagtactctcagtggaaaggtctcgtccccattctctacgattgg
ctcgccaaccacaacctcgtctggccttcactctcttgcagatggggtcctcagcttgac
caagccacctacaagaatcgccagcgtctgtatctctcagagcaaactgatggcagtgtg
cctaatactctggtaatagcgaattgcgaagttgttaagccaagggtcgctgcagcagag
cacatatctcagttcaatgaagaagcacgttctccatttgtgaagaagtacaagaccatc
attcaccctggagaggttaacagaatcagggaactcccgcagaacagtaagattgttgct
actcacaccgacagtcctgatgttctcatttgggatgttgaaacccaaccaaaccgtcat
gcggtgcttggagctgcaaattcccgaccggatttgatactaactggacaccaagataat
gctgaatttgctcttgcaatgtgcccaacggaaccctttgtgctctctggaggcaaggac
aagtcagttgttttgtggagtatccaggaccacatcacaactgctgggacagcttctgga
tctatcgtcaaacagactggtgaaggtagtgataagaatgagagtccttctgttggcccc
cgaggtgtatatcatggccatgaagatactgttgaagatgtggcattcagcccaacgagt
gcacaagaattctgcagtgttggtgatgattcttgccttatactatgggatgcaagaact
ggcacaaaccctgtcaccaaggttgctaaggcgcatgatgctgatcttcattgtgtcgat
tggaatcctcatgatgacaatctgatcctgacagggtcagcagacaacactgtccggttg
tttgatcgtaggagccttacctcaaatggagtcggttcgcctatttacaaatttgagggc
cacaaagctgctgttctttgtgttcagtggtctcctgataagtcatctgtttttgggagt
tctgcagaagatggtcttttgaacatctgggattatgacatggtcagtaagaagtctggt
cttgcagctaaaagccctgctggactcttcttccagcatgctggtcacagggacaaagtt
gttgatttccattggaatgcgtcggacccttggactattgtcagtgtttctgatgactgt
gagacgactggtggaggtggaacattgcagatatggaggatgagtgacttgatttacaga
ccggaagaggaagtcctgcaagaattggagaagttcaagtcgcatgtaatgacttgtgcc
tccaagccttga
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