Camelina sativa (false flax): 104702799
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Entry
104702799 CDS
T05044
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104702799
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104702799
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
Motif
Other DBs
NCBI-GeneID:
104702799
NCBI-ProteinID:
XP_010417021
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Position
7:complement(26864244..26870117)
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AA seq
679 aa
AA seq
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MKVGAPANKPGRIIVQVLLLVLLVLLLQSVHSQNSRNKLNITKPGKNIPAALTVQLRRVS
HDKVVIDNGIIQVTFSSPQGLITGIKYHGIDNVLDDEIEDRGYWDVTWYEPGKKLEIDKL
EGTKFEIITQNEEQVEISFTRTWTISKRGSLVPLNVDKRYIIRSGVSGIYMYGILERLED
WPDVDMDQIRIVFKLNPKKFDFMAISDDRQRSMPSMADRDNAKQLAYKEAVLFTNPRNPM
FKGEVDDKYMYSMEDKDNNVHGWISSEPPVGFWMITPNDEFRLGGPMKQDLTSHAGPITL
SMFTSTHYAGKEMRMDYRNGEPWKKVFGPVFAYLNSVSPKDSTLRLWRDAKRQMAAEVKS
WPYDFVTSVDYPLRHQRGTIEGQFLIKDSYVSRLRIYGRYSFVGLAPIGEAGSWQTESKG
YQFWTKADRKGRFIIENVRAGNYSLYAWGFGFIGDYKFEQNITITPGSVMNVGPIVYEPP
RNGPTLWEIGVPDRTAREFYIPDPYPTLMNKLYVNPLQDRFRQYGLWDRYADLYPQNDLV
YTVGVSDYRRDWFFAHVTRNVGNNTYNPTTWQIIFNLRNVNRVGLYTLRIALASAANSEL
QIRINDPKSDHIFTTGYIGKDNAIARHGIHGLYRLYSIDVAGSLLNVGDNTIYLTQSRSL
GLFDGIMYDYIRLESPFRT
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcggagctccggcgaataagccgggtcggatcattgtccaagttcttcttctt
gttcttcttgttcttcttcttcaaagtgttcattctcagaactcacgaaacaaacttaac
atcacaaagcctggaaaaaacatacctgcagccttaacagttcagctaagaagagttagt
catgacaaggtggtaattgataatggtattattcaagttactttctcgagcccacaaggc
ttaataactgggataaaataccatggtatcgataatgtgctggacgacgagattgaggat
cgggggtattgggacgttacctggtatgaaccgggaaagaaattggaaatcgacaaatta
gaaggaactaaatttgaaatcataactcagaatgaagaacaagttgaaatatcatttaca
agaacgtggactatctccaaacgtggctccttggttcccctaaacgtagataaaagatat
atcattcgaagtggtgtctccggaatatatatgtacggtatcttggagaggttagaagat
tggcccgacgtggacatggaccaaatcaggatcgtcttcaagctcaacccaaaaaaattt
gatttcatggcgatatcggatgatcggcagagaagcatgccatcaatggcggatcgagac
aatgctaagcaattagcttacaaagaagctgttctttttacaaatccaaggaatcctatg
ttcaaaggagaggtagatgataagtatatgtactcaatggaagacaaagacaacaatgtg
catggttggatctcatcggaaccaccggttgggttttggatgataactccgaacgatgag
ttccgtcttggtggccccatgaagcaagacctcacctctcatgccggacccatcaccctc
tccatgtttacaagcacgcattacgcggggaaagagatgagaatggattatagaaatgga
gagccatggaagaaagtgtttggtcctgtcttcgcttatctcaactctgtttctcccaaa
gattccactcttcgtctatggagagatgctaaacgacagatggctgcagaggtcaaaagc
tggccttatgattttgttacttcagtagattatcctctgcgtcatcaaagaggtactatc
gaaggacaattccttatcaaagatagctacgtgtcaagattaaggatatatgggagatat
tcttttgttggtctggcaccaattggtgaagccggttcatggcaaaccgaatccaagggg
tatcaattttggacgaaagctgacagaaaagggagatttataatagagaatgtgagggca
ggcaattatagtctctacgcatggggttttggtttcattggagactataaatttgagcaa
aacattaccattacgccaggtagcgtgatgaatgtaggtcccatagtgtatgaaccgccg
agaaacggtccgacgttgtgggaaatcggtgtacctgaccgaaccgccagagaattctat
ataccggatccataccctacactgatgaataagctttatgtcaacccactccaagacaga
tttaggcaatatggattatgggatcgttacgcagatttataccctcaaaacgatcttgtg
tacacagtgggtgtgagtgattatagaagagattggttctttgcacatgttaccagaaac
gttggaaacaatacatacaacccaacgacatggcaaatcatatttaacctgagaaacgtg
aaccgagtcggactctacacgctcagaatagctctagcctcagccgcaaattccgaacta
caaattcggatcaacgatcccaaatccgatcatattttcacgacgggttatatcggaaaa
gacaatgcaatcgcgagacatggaattcatggtttatatagattgtatagtatagacgtc
gccggaagtttactaaatgttggtgataatacgatatatttaacacaatcgagaagttta
ggactatttgatggtattatgtatgattatattcgtcttgaaagtccttttagaacttga
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